1KFG

1000 Fungal genomes

Pinned Repositories

AFTOL_resources
Resources related to AFTOL1 and AFTOL2 projects
1 2 01
analyses
1KFG analyses
Language:Shell1 8 00
annotate_genomes
Genome annotation for unannotated projects
Language:Shell1 7 10
Freeze1_Phylogenomics
Freeze of 351 genome set for first 1KFG genome paper
0 2 00
genome_stats
Summary Statistics about fungal genomes
Language:Perl3 3 02
NCBI_fungi
Download NCBI fungi and process for stats
Language:Python0 7 00
outgroups
Outgroups genomes and data
0 2 00
PHYling_HMMs_fungi
PHYling HMM datasets for Fungi
0 2 00
Phylogenomics
Phylogenomics analyses for 1KFG project
Language:Shell6 4 00
Phylogenomics_HMMs
HMMs for Phylogenomics projects
0 2 01

1KFG's Repositories

1KFG/Phylogenomics
Phylogenomics analyses for 1KFG project
Language:Shell6 4 00
1KFG/genome_stats
Summary Statistics about fungal genomes
Language:Perl3 3 02
1KFG/AFTOL_resources
Resources related to AFTOL1 and AFTOL2 projects
1 2 01
1KFG/analyses
1KFG analyses
Language:Shell1 8 00
1KFG/annotate_genomes
Genome annotation for unannotated projects
Language:Shell1 7 10
1KFG/1kfg.github.io
1000 Fungal Genomes Project
Language:SCSS0 0 00
1KFG/1kfg_phylo_paper
1000 Fungal Genomes Phylogeny and phylogenomics paper
Language:Shell0 1 01
1KFG/Freeze1_Phylogenomics
Freeze of 351 genome set for first 1KFG genome paper
0 2 00
1KFG/NCBI_fungi
Download NCBI fungi and process for stats
Language:Python0 7 00
1KFG/outgroups
Outgroups genomes and data
0 2 00
1KFG/PHYling_HMMs_fungi
PHYling HMM datasets for Fungi
0 2 00
1KFG/Phylogenomics_HMMs
HMMs for Phylogenomics projects
0 2 01
1KFG/2019_dataset
Try again creating frozen dataset
Language:Python3 0
1KFG/FunAnnotationCommon
Funannotate quick annotation
Language:Python
1KFG/genome_sizes
Fungal Genome Sizes
Language:R2 0