AllenNeuralDynamics/aind-data-schema

Issues

• Brain atlas model for targeted structures

  #1057 opened 4 months ago by saskiad
  1

• Scope out opportunities to simplify aind-data-schema

  #1056 opened 2 months ago by dyf
  6

• Move metadata.nd.json logic to aind-data-schema

  #1066 opened 3 months ago by mekhlakapoor
  0

• last_modified field is losing it's timestamp in DocDB

  #1087 opened 3 months ago by dbirman
  0

• Consider changing the default deserialization `extra` mode to `allow`

  #1079 opened 2 months ago by bruno-f-cruz
  1

• Support multi-session quality_control by tracking metric or evaluation provenance

  #1090 opened 2 months ago by dbirman
  1

• Convert all optional values with required units to have both optional value and value_unit, enforce their state with a global validator

  #1091 opened 3 months ago by dbirman
  1

• anatomical_coordinates should expect CCFCoords

  #1098 opened 3 months ago by mekhlakapoor
  4

• Add explicit default to schema_version to suppress pylance warnings

  #1076 opened 2 months ago by dbirman
  0

• Refactor describedBy field to a Literal, or add default=

  #1077 opened 2 months ago by dbirman
  0

• Refactor core file validators based on aind-data-schema-models expected modalities

  #1061 opened 3 months ago by dbirman
  1

• Bump aind-flake8-extensions to 0.6

  #1086 opened 3 months ago by dbirman
  1

• Schema version field prevents validating older versioned data

  #1099 opened 3 months ago by dbirman
  2

• Rename data_description modality field to modalities

  #1083 opened 3 months ago by dbirman
  1

• Track MetadataStatus of AindCoreModel

  #1100 opened 3 months ago by dbirman
  0

• Generate examples json files at test time

  #1064 opened 3 months ago by dbirman
  1

• [QC] Add validator that ensures at least one status value is passed in the metric_status_history list

  #1085 opened 3 months ago by dbirman
  0

• Add asset_id to QCEvaluation

  #1088 opened 3 months ago by dbirman
  2

• [QC] Automate state properties in QualityControl and Evaluation based on metric states

  #1072 opened 3 months ago by dbirman
  1

• QC docs

  #1047 opened 3 months ago by dbirman
  1

• Pin aind-flake8-extensions

  #1081 opened 3 months ago by dbirman
  0

• Schema for models

  #1078 opened 3 months ago by saskiad
  0

• TypeError in Injection model

  #1065 opened 3 months ago by micahwoodard
  9

• Breaking changes in pydantic 2.9 (part 2)

  #1058 opened 3 months ago by dbirman
  2

• [QC] Add state for qc metrics

  #1071 opened 3 months ago by dbirman
  2

• Quality control needs versioning for evaluations

  #1062 opened 3 months ago by dbirman
  2

• [QC] Fail -> critical fail, add flag

  #1070 opened 3 months ago by dbirman
  1

• Enforce default formatting

  #1043 opened 3 months ago by dbirman
  2

• Breaking changes in pydantic 2.9

  #1050 opened 4 months ago by dbirman
  4

• Improve docs regarding modality and the usage of different metadata files

  #1001 opened 4 months ago by Sun-flow
  2

• allow `DataDescription.input_data` to be a list

  #1045 opened 4 months ago by dyf
  0

• Can we make the error messages be useful?

  #1012 opened 4 months ago by saskiad
  1

• Default value for external_links should match type

  #1046 opened 4 months ago by jtyoung84
  1

• Add pending to QC status options

  #1038 opened 4 months ago by dbirman
  1

• Limit pydantic version to <2.9

  #1049 opened 4 months ago by dbirman
  0

• Default external_links value incorrect

  #1044 opened 4 months ago by helen-m-lin
  2

• fix mistakes in fip_behavior_rig

  #997 opened 4 months ago by saskiad
  0

• enable QCEvaluation to include path to images

  #1021 opened 4 months ago by saskiad
  6

• Field(default=None, ) consistency for optional fields

  #1040 opened 4 months ago by dbirman
  0

• Options for muscle targets and myomatrix arrays

  #996 opened 4 months ago by lambdaloop
  4

• aind-data-schema 1.0

  #990 opened 4 months ago by dyf
  0

• Update schemas to v 1.0

  #1027 opened 4 months ago by jtyoung84
  0

• fix single cell morphology data access page

  #1020 opened 4 months ago by saskiad
  0

• Create a core schema for quality control

  #1018 opened 4 months ago by dyf
  1

• support aind-data-schema-models 0.3

  #1006 opened 4 months ago by dyf
  0

• temporarily cap version of aind-data-schema-models

  #1004 opened 5 months ago by dyf
  0

• tag_and_publish github action broken

  #1008 opened 5 months ago by jtyoung84
  1

• Adding output_parameters to the Session

  #993 opened 5 months ago by XX-Yin
  0

• Make `slav_fovs` a list

  #988 opened 5 months ago by dyf
  0

• track injection virus volume

  #992 opened 5 months ago by mekhlakapoor
  1