Find why/how to use boost and openmpi with vpkg for unix
Closed this issue · 3 comments
JasonMarechal25 commented
For Linux platforms (CentOS and Ubuntu) and specifically Ubuntu where it has been tested, there is an issue when trying to run the executable "SingleFile" coming from a workflow where boost and openmpi have been installed through vcpkg.
Here is the error:
$ ./antares-xpansion-launcher -i examples/SmallTestFiveCandidates
----------------------------------------------------------------
[Pre Antares][INFO 25-07-2024 16:58:01] Running Antares Xpansion ...
[Pre Antares][INFO 25-07-2024 16:58:01] user: REDACTED
[Pre Antares][INFO 25-07-2024 16:58:01] hostname: gm0winl477.bureau.si.interne
[Pre Antares][INFO 25-07-2024 16:58:01] Xpansion version: 1.3.2
[Pre Antares][INFO 25-07-2024 16:58:01] antares simulator version: 9.1
----------------------------------------------------------------
[StudyLocker][INFO 25-07-2024 16:58:01] examples/SmallTestFiveCandidates is locked
[ConfigLoader][INFO 25-07-2024 16:58:01] No solver defined in user/expansion/settings.ini. Cbc used
[GeneralDataProcessor][INFO 25-07-2024 16:58:01] Pre Antares
[AntaresDriver][INFO 25-07-2024 16:58:01] Launching antares
[AntaresDriver][INFO 25-07-2024 16:58:07] Antares simulation duration : 0:00:05.784598
[XpansionDriver][INFO 25-07-2024 16:58:07] Post Antares
[FullRunDriver][INFO 25-07-2024 16:58:07] Current directory is now: /home/REDACTED/Téléchargements/v1.3.2/3/examples/SmallTestFiveCandidates/output/20240725-1658eco-Xpansion/lp
[FullRunDriver][INFO 25-07-2024 16:58:07] Command: ['/tmp/_MEISihm3L/bin/full_run', '--benders_options', 'options.json', '-s', '/home/REDACTED/Téléchargements/v1.3.2/3/examples/SmallTestFiveCandidates/output/20240725-1658eco-Xpansion/expansion/out.json', '--solver', 'benders', '-a', '/home/REDACTED/Téléchargements/v1.3.2/3/examples/SmallTestFiveCandidates/output/20240725-1658eco.zip', '-f', 'integer', '-e', '/home/REDACTED/Téléchargements/v1.3.2/3/examples/SmallTestFiveCandidates/user/expansion/constraints/contraintes.txt']
Full Run
PATH: /home/REDACTED/.nvm/versions/node/v20.4.0/bin:/home/REDACTED/.local/bin:/home/REDACTED/bin:/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin:/sbin:/bin:/usr/games:/usr/local/games:/snap/bin:/home/REDACTED/clion/beta/bin/:/home/REDACTED/bin:/home/REDACTED/opt/bin:/home/REDACTED/opt/cmake-3.22.6/bin:/home/REDACTED/opt/ccache:/home/REDACTED/opt/xpressmp/bin:/home/REDACTED/CLionProjects/iwyu/build/bin:/home/REDACTED/opt:/home/REDACTED/opt/firefox:/home/REDACTED/opt/heaptrack/bin:/home/REDACTED/clion/beta/bin/:/home/REDACTED/bin:/home/REDACTED/opt/bin:/home/REDACTED/opt/cmake-3.22.6/bin:/home/REDACTED/opt/ccache:/home/REDACTED/CLionProjects/iwyu/build/bin:/home/REDACTED/opt:/home/REDACTED/opt/firefox:/home/REDACTED/opt/heaptrack/bin
LD_LIBRARY_PATH: /tmp/_MEISihm3L::/lib/x86_64-linux-gnu/:/home/REDACTED/opt/xpressmp/lib:/lib/x86_64-linux-gnu/
--------------------------------------------------------------------------
Sorry! You were supposed to get help about:
opal_init:startup:internal-failure
But I couldn't open the help file:
/home/runner/work/antares-xpansion/antares-xpansion/_build/vcpkg_installed/x64-linux/share/openmpi/openmpi/help-opal-runtime.txt: No such file or directory. Sorry!
--------------------------------------------------------------------------
--------------------------------------------------------------------------
Sorry! You were supposed to get help about:
orte_init:startup:internal-failure
But I couldn't open the help file:
/home/runner/work/antares-xpansion/antares-xpansion/_build/vcpkg_installed/x64-linux/share/openmpi/openmpi/help-orte-runtime: No such file or directory. Sorry!
--------------------------------------------------------------------------
--------------------------------------------------------------------------
Sorry! You were supposed to get help about:
mpi_init:startup:internal-failure
But I couldn't open the help file:
/home/runner/work/antares-xpansion/antares-xpansion/_build/vcpkg_installed/x64-linux/share/openmpi/openmpi/help-mpi-runtime.txt: No such file or directory. Sorry!
--------------------------------------------------------------------------
*** An error occurred in MPI_Init
*** on a NULL communicator
*** MPI_ERRORS_ARE_FATAL (processes in this communicator will now abort,
*** and potentially your MPI job)
[gm0winl477.bureau.si.interne:616339] Local abort before MPI_INIT completed completed successfully, but am not able to aggregate error messages, and not able to guarantee that all other processes were killed!
Traceback (most recent call last):
File "launch.py", line 51, in <module>
File "antares_xpansion/driver.py", line 79, in launch
File "antares_xpansion/full_run_driver.py", line 60, in launch
File "antares_xpansion/full_run_driver.py", line 74, in run
antares_xpansion.full_run_driver.FullRunExecutionError: ERROR: exited /tmp/_MEISihm3L/bin/full_run with status 1
[616312] Failed to execute script 'launch' due to unhandled exception!
It doesn't occur when using "classic" assets. It also doesn't occurs when building a "SingleFile" executable locally
Some ideas :
Try execution with a valid LD_LIBRARY_PATH
Try to use boost with vcpkg but keep building openmpi
Try to clear LD_LIBRARY_PATH/PATH from vcpkg path when building pyexe
Same but look at rpath
JasonMarechal25 commented
To extract an executable generated by pyinstaller one can use https://github.com/extremecoders-re/pyinstxtractor/blob/master/pyinstxtractor.py
a-zakir commented
Je suis hautement intéressé !
JasonMarechal25 commented
The issue stem from a difference in behavior between different version of pyinstaller, namely version 4 and 6.
Difference centOS and ubuntu
Requirement.txt set pyinstaller version to 4.3 and above. On CentOS we were "stuck" with version 4. On ubuntu we could get the latest version 6.9.0. This is why we didn't encounter any issue with centOS and only with ubuntu.
Description of the issue
By extracting the content of the pyinstaller archive we could observe two things depending on the plateform, or more accurately depending on the version of pyinstaller. In short: pyinstaller 6.x also copy libraries in the root of the archive.
6.x with openMPI and boost build manually or system
ls **
base_library.zip libsirius_solver.so
config.yaml libssl.so.1.1
launch.pyc libstdc++.so.6
libbz2.so.1.0 libtinfo.so.6
libcrypto.so.1.1 libuuid.so.1
libffi.so.7 libz.so.1
libgcc_s.so.1 pyiboot01_bootstrap.pyc
libgfortran-040039e1.so.5.0.0 pyimod01_archive.pyc
liblzma.so.5 pyimod02_importers.pyc
libmpi.so.40 pyimod03_ctypes.pyc
libncursesw.so.6 pyi_rth_inspect.pyc
libopenblas64_p-r0-15028c96.3.21.so pyi_rth_multiprocessing.pyc
libopen-pal.so.40 pyi_rth_pkgres.pyc
libopen-rte.so.40 pyi_rth_pkgutil.pyc
libpython3.8.so.1.0 PYZ-00.pyz
libquadmath-96973f99.so.0.0.0 struct.pyc
libreadline.so.8
bin:
antares_archive_updater libboost_program_options.a merge_mps
antares-solver libboost_serialization.a outer_loop
benders libjsoncpp.a sensitivity
full_run libsirius_solver.so xpansion-study-updater
libboost_mpi.a lp_namer
lib-dynload:
array.cpython-38-x86_64-linux-gnu.so
_asyncio.cpython-38-x86_64-linux-gnu.so
binascii.cpython-38-x86_64-linux-gnu.so
_bisect.cpython-38-x86_64-linux-gnu.so
_blake2.cpython-38-x86_64-linux-gnu.so
_bz2.cpython-38-x86_64-linux-gnu.so
_codecs_cn.cpython-38-x86_64-linux-gnu.so
_codecs_hk.cpython-38-x86_64-linux-gnu.so
_codecs_iso2022.cpython-38-x86_64-linux-gnu.so
_codecs_jp.cpython-38-x86_64-linux-gnu.so
_codecs_kr.cpython-38-x86_64-linux-gnu.so
_codecs_tw.cpython-38-x86_64-linux-gnu.so
_contextvars.cpython-38-x86_64-linux-gnu.so
_csv.cpython-38-x86_64-linux-gnu.so
_ctypes.cpython-38-x86_64-linux-gnu.so
_curses.cpython-38-x86_64-linux-gnu.so
_datetime.cpython-38-x86_64-linux-gnu.so
_decimal.cpython-38-x86_64-linux-gnu.so
fcntl.cpython-38-x86_64-linux-gnu.so
grp.cpython-38-x86_64-linux-gnu.so
_hashlib.cpython-38-x86_64-linux-gnu.so
_heapq.cpython-38-x86_64-linux-gnu.so
_json.cpython-38-x86_64-linux-gnu.so
_lzma.cpython-38-x86_64-linux-gnu.so
math.cpython-38-x86_64-linux-gnu.so
_md5.cpython-38-x86_64-linux-gnu.so
mmap.cpython-38-x86_64-linux-gnu.so
_multibytecodec.cpython-38-x86_64-linux-gnu.so
_multiprocessing.cpython-38-x86_64-linux-gnu.so
_opcode.cpython-38-x86_64-linux-gnu.so
_pickle.cpython-38-x86_64-linux-gnu.so
_posixshmem.cpython-38-x86_64-linux-gnu.so
_posixsubprocess.cpython-38-x86_64-linux-gnu.so
pyexpat.cpython-38-x86_64-linux-gnu.so
_queue.cpython-38-x86_64-linux-gnu.so
_random.cpython-38-x86_64-linux-gnu.so
readline.cpython-38-x86_64-linux-gnu.so
resource.cpython-38-x86_64-linux-gnu.so
select.cpython-38-x86_64-linux-gnu.so
_sha1.cpython-38-x86_64-linux-gnu.so
_sha256.cpython-38-x86_64-linux-gnu.so
_sha3.cpython-38-x86_64-linux-gnu.so
_sha512.cpython-38-x86_64-linux-gnu.so
_socket.cpython-38-x86_64-linux-gnu.so
_ssl.cpython-38-x86_64-linux-gnu.so
_struct.cpython-38-x86_64-linux-gnu.so
termios.cpython-38-x86_64-linux-gnu.so
unicodedata.cpython-38-x86_64-linux-gnu.so
_uuid.cpython-38-x86_64-linux-gnu.so
zlib.cpython-38-x86_64-linux-gnu.so
numpy:
core fft linalg random
numpy.libs:
libgfortran-040039e1.so.5.0.0 libquadmath-96973f99.so.0.0.0
libopenblas64_p-r0-15028c96.3.21.so
psutil:
_psutil_linux.cpython-38-x86_64-linux-gnu.so
_psutil_posix.cpython-38-x86_64-linux-gnu.so
PYZ-00.pyz_extracted:
antares_xpansion optparse.pyc
argparse.pyc _osx_support.pyc
ast.pyc packaging
asyncio pathlib.pyc
base64.pyc pdb.pyc
bdb.pyc pickle.pyc
bisect.pyc pkg_resources
bz2.pyc pkgutil.pyc
calendar.pyc platform.pyc
cmd.pyc plistlib.pyc
codeop.pyc pprint.pyc
code.pyc psutil
_compat_pickle.pyc _py_abc.pyc
_compression.pyc py_compile.pyc
concurrent _pydecimal.pyc
configparser.pyc pydoc_data
contextlib.pyc pydoc.pyc
contextvars.pyc _pyi_rth_utils
copy.pyc queue.pyc
csv.pyc quopri.pyc
ctypes random.pyc
curses runpy.pyc
dataclasses.pyc secrets.pyc
datetime.pyc selectors.pyc
decimal.pyc shlex.pyc
difflib.pyc shutil.pyc
dis.pyc signal.pyc
distutils socket.pyc
doctest.pyc socketserver.pyc
dummy_threading.pyc ssl.pyc
_dummy_thread.pyc stringprep.pyc
email string.pyc
fnmatch.pyc _strptime.pyc
ftplib.pyc subprocess.pyc
__future__.pyc _sysconfigdata__linux_x86_64-linux-gnu.pyc
getopt.pyc sysconfig.pyc
getpass.pyc tarfile.pyc
gettext.pyc tempfile.pyc
glob.pyc textwrap.pyc
gzip.pyc _threading_local.pyc
hashlib.pyc threading.pyc
hmac.pyc tokenize.pyc
html token.pyc
http tracemalloc.pyc
importlib tty.pyc
imp.pyc typing.pyc
inspect.pyc unittest
json urllib
logging uuid.pyc
lzma.pyc uu.pyc
mimetypes.pyc webbrowser.pyc
multiprocessing xml
netrc.pyc xmlrpc
nturl2path.pyc yaml
numbers.pyc zipfile.pyc
numpy zipimport.pyc
opcode.pyc
yaml:
_yaml.cpython-38-x86_64-linux-gnu.so
We can see that **libmpi.so.40 ** appears at the root of the archive
6.x with openMPI and boost build manually or system
ls **
base_library.zip libopen-rte.so.40
config.yaml libpython3.8.so.1.0
launch.pyc libquadmath-96973f99.so.0.0.0
libboost_mpi.so.1.81.0 libreadline.so.8
libboost_program_options.so.1.81.0 libsirius_solver.so
libboost_serialization.so.1.81.0 libssl.so.1.1
libbz2.so.1.0 libstdc++.so.6
libcrypto.so.1.1 libtinfo.so.6
libffi.so.7 libuuid.so.1
libgcc_s.so.1 libz.so.1
libgfortran-040039e1.so.5.0.0 pyiboot01_bootstrap.pyc
liblzma.so.5 pyimod01_archive.pyc
libmca_common_dstore.so.1 pyimod02_importers.pyc
libmca_common_monitoring.so.50 pyimod03_ctypes.pyc
libmca_common_ompio.so.41 pyi_rth_inspect.pyc
libmca_common_sm.so.40 pyi_rth_multiprocessing.pyc
libmpi.so.40 pyi_rth_pkgres.pyc
libncursesw.so.6 pyi_rth_pkgutil.pyc
libopenblas64_p-r0-15028c96.3.21.so PYZ-00.pyz
libopen-pal.so.40 struct.pyc
bin:
antares_archive_updater libjsoncpp.a
antares-solver libsirius_solver.so
benders lp_namer
full_run merge_mps
libboost_mpi.so ompi_monitoring_prof.so
libboost_mpi.so.1.81.0 openmpi
libboost_program_options.so outer_loop
libboost_program_options.so.1.81.0 pmix
libboost_serialization.so sensitivity
libboost_serialization.so.1.81.0 xpansion-study-updater
lib-dynload:
array.cpython-38-x86_64-linux-gnu.so
_asyncio.cpython-38-x86_64-linux-gnu.so
binascii.cpython-38-x86_64-linux-gnu.so
_bisect.cpython-38-x86_64-linux-gnu.so
_blake2.cpython-38-x86_64-linux-gnu.so
_bz2.cpython-38-x86_64-linux-gnu.so
_codecs_cn.cpython-38-x86_64-linux-gnu.so
_codecs_hk.cpython-38-x86_64-linux-gnu.so
_codecs_iso2022.cpython-38-x86_64-linux-gnu.so
_codecs_jp.cpython-38-x86_64-linux-gnu.so
_codecs_kr.cpython-38-x86_64-linux-gnu.so
_codecs_tw.cpython-38-x86_64-linux-gnu.so
_contextvars.cpython-38-x86_64-linux-gnu.so
_csv.cpython-38-x86_64-linux-gnu.so
_ctypes.cpython-38-x86_64-linux-gnu.so
_curses.cpython-38-x86_64-linux-gnu.so
_datetime.cpython-38-x86_64-linux-gnu.so
_decimal.cpython-38-x86_64-linux-gnu.so
fcntl.cpython-38-x86_64-linux-gnu.so
grp.cpython-38-x86_64-linux-gnu.so
_hashlib.cpython-38-x86_64-linux-gnu.so
_heapq.cpython-38-x86_64-linux-gnu.so
_json.cpython-38-x86_64-linux-gnu.so
_lzma.cpython-38-x86_64-linux-gnu.so
math.cpython-38-x86_64-linux-gnu.so
_md5.cpython-38-x86_64-linux-gnu.so
mmap.cpython-38-x86_64-linux-gnu.so
_multibytecodec.cpython-38-x86_64-linux-gnu.so
_multiprocessing.cpython-38-x86_64-linux-gnu.so
_opcode.cpython-38-x86_64-linux-gnu.so
_pickle.cpython-38-x86_64-linux-gnu.so
_posixshmem.cpython-38-x86_64-linux-gnu.so
_posixsubprocess.cpython-38-x86_64-linux-gnu.so
pyexpat.cpython-38-x86_64-linux-gnu.so
_queue.cpython-38-x86_64-linux-gnu.so
_random.cpython-38-x86_64-linux-gnu.so
readline.cpython-38-x86_64-linux-gnu.so
resource.cpython-38-x86_64-linux-gnu.so
select.cpython-38-x86_64-linux-gnu.so
_sha1.cpython-38-x86_64-linux-gnu.so
_sha256.cpython-38-x86_64-linux-gnu.so
_sha3.cpython-38-x86_64-linux-gnu.so
_sha512.cpython-38-x86_64-linux-gnu.so
_socket.cpython-38-x86_64-linux-gnu.so
_ssl.cpython-38-x86_64-linux-gnu.so
_struct.cpython-38-x86_64-linux-gnu.so
termios.cpython-38-x86_64-linux-gnu.so
unicodedata.cpython-38-x86_64-linux-gnu.so
_uuid.cpython-38-x86_64-linux-gnu.so
zlib.cpython-38-x86_64-linux-gnu.so
numpy:
core fft linalg random
numpy.libs:
libgfortran-040039e1.so.5.0.0 libquadmath-96973f99.so.0.0.0
libopenblas64_p-r0-15028c96.3.21.so
psutil:
_psutil_linux.cpython-38-x86_64-linux-gnu.so
_psutil_posix.cpython-38-x86_64-linux-gnu.so
PYZ-00.pyz_extracted:
antares_xpansion optparse.pyc
argparse.pyc _osx_support.pyc
ast.pyc packaging
asyncio pathlib.pyc
base64.pyc pdb.pyc
bdb.pyc pickle.pyc
bisect.pyc pkg_resources
bz2.pyc pkgutil.pyc
calendar.pyc platform.pyc
cmd.pyc plistlib.pyc
codeop.pyc pprint.pyc
code.pyc psutil
_compat_pickle.pyc _py_abc.pyc
_compression.pyc py_compile.pyc
concurrent _pydecimal.pyc
configparser.pyc pydoc_data
contextlib.pyc pydoc.pyc
contextvars.pyc _pyi_rth_utils
copy.pyc queue.pyc
csv.pyc quopri.pyc
ctypes random.pyc
curses runpy.pyc
dataclasses.pyc secrets.pyc
datetime.pyc selectors.pyc
decimal.pyc shlex.pyc
difflib.pyc shutil.pyc
dis.pyc signal.pyc
distutils socket.pyc
doctest.pyc socketserver.pyc
dummy_threading.pyc ssl.pyc
_dummy_thread.pyc stringprep.pyc
email string.pyc
fnmatch.pyc _strptime.pyc
ftplib.pyc subprocess.pyc
__future__.pyc _sysconfigdata__linux_x86_64-linux-gnu.pyc
getopt.pyc sysconfig.pyc
getpass.pyc tarfile.pyc
gettext.pyc tempfile.pyc
glob.pyc textwrap.pyc
gzip.pyc _threading_local.pyc
hashlib.pyc threading.pyc
hmac.pyc tokenize.pyc
html token.pyc
http tracemalloc.pyc
importlib tty.pyc
imp.pyc typing.pyc
inspect.pyc unittest
json urllib
logging uuid.pyc
lzma.pyc uu.pyc
mimetypes.pyc webbrowser.pyc
multiprocessing xml
netrc.pyc xmlrpc
nturl2path.pyc yaml
numbers.pyc zipfile.pyc
numpy zipimport.pyc
opcode.pyc
yaml:
_yaml.cpython-38-x86_64-linux-gnu.so
Here we can see that boost libraries are present in bin but also at the root of archive
4.x
ls **
base_library.zip libssl.so.1.1
config.yaml libtinfo.so.6
launch.pyc libuuid.so.1
libbz2.so.1.0 libz.so.1
libcrypto.so.1.1 pyiboot01_bootstrap.pyc
libffi.so.7 pyimod01_os_path.pyc
libgcc_s.so.1 pyimod02_archive.pyc
libgfortran-040039e1.so.5.0.0 pyimod03_importers.pyc
liblzma.so.5 pyi_rth_multiprocessing.pyc
libncursesw.so.6 pyi_rth_pkgres.pyc
libopenblas64_p-r0-15028c96.3.21.so PYZ-00.pyz
libpython3.8.so.1.0 _struct.cpython-38-x86_64-linux-gnu.so
libquadmath-96973f99.so.0.0.0 struct.pyc
libreadline.so.8 zlib.cpython-38-x86_64-linux-gnu.so
bin:
antares_archive_updater libjsoncpp.a
antares-solver libsirius_solver.so
benders lp_namer
full_run merge_mps
libboost_mpi.so ompi_monitoring_prof.so
libboost_mpi.so.1.81.0 openmpi
libboost_program_options.so outer_loop
libboost_program_options.so.1.81.0 pmix
libboost_serialization.so sensitivity
libboost_serialization.so.1.81.0 xpansion-study-updater
lib-dynload:
array.cpython-38-x86_64-linux-gnu.so
_asyncio.cpython-38-x86_64-linux-gnu.so
binascii.cpython-38-x86_64-linux-gnu.so
_bisect.cpython-38-x86_64-linux-gnu.so
_blake2.cpython-38-x86_64-linux-gnu.so
_bz2.cpython-38-x86_64-linux-gnu.so
_codecs_cn.cpython-38-x86_64-linux-gnu.so
_codecs_hk.cpython-38-x86_64-linux-gnu.so
_codecs_iso2022.cpython-38-x86_64-linux-gnu.so
_codecs_jp.cpython-38-x86_64-linux-gnu.so
_codecs_kr.cpython-38-x86_64-linux-gnu.so
_codecs_tw.cpython-38-x86_64-linux-gnu.so
_contextvars.cpython-38-x86_64-linux-gnu.so
_csv.cpython-38-x86_64-linux-gnu.so
_ctypes.cpython-38-x86_64-linux-gnu.so
_curses.cpython-38-x86_64-linux-gnu.so
_datetime.cpython-38-x86_64-linux-gnu.so
_decimal.cpython-38-x86_64-linux-gnu.so
fcntl.cpython-38-x86_64-linux-gnu.so
grp.cpython-38-x86_64-linux-gnu.so
_hashlib.cpython-38-x86_64-linux-gnu.so
_heapq.cpython-38-x86_64-linux-gnu.so
_json.cpython-38-x86_64-linux-gnu.so
_lzma.cpython-38-x86_64-linux-gnu.so
math.cpython-38-x86_64-linux-gnu.so
_md5.cpython-38-x86_64-linux-gnu.so
mmap.cpython-38-x86_64-linux-gnu.so
_multibytecodec.cpython-38-x86_64-linux-gnu.so
_multiprocessing.cpython-38-x86_64-linux-gnu.so
_opcode.cpython-38-x86_64-linux-gnu.so
_pickle.cpython-38-x86_64-linux-gnu.so
_posixshmem.cpython-38-x86_64-linux-gnu.so
_posixsubprocess.cpython-38-x86_64-linux-gnu.so
pyexpat.cpython-38-x86_64-linux-gnu.so
_queue.cpython-38-x86_64-linux-gnu.so
_random.cpython-38-x86_64-linux-gnu.so
readline.cpython-38-x86_64-linux-gnu.so
resource.cpython-38-x86_64-linux-gnu.so
select.cpython-38-x86_64-linux-gnu.so
_sha1.cpython-38-x86_64-linux-gnu.so
_sha256.cpython-38-x86_64-linux-gnu.so
_sha3.cpython-38-x86_64-linux-gnu.so
_sha512.cpython-38-x86_64-linux-gnu.so
_socket.cpython-38-x86_64-linux-gnu.so
_ssl.cpython-38-x86_64-linux-gnu.so
_struct.cpython-38-x86_64-linux-gnu.so
termios.cpython-38-x86_64-linux-gnu.so
unicodedata.cpython-38-x86_64-linux-gnu.so
_uuid.cpython-38-x86_64-linux-gnu.so
zlib.cpython-38-x86_64-linux-gnu.so
numpy:
core fft linalg random
psutil:
_psutil_linux.cpython-38-x86_64-linux-gnu.so
_psutil_posix.cpython-38-x86_64-linux-gnu.so
PYZ-00.pyz_extracted:
antares_xpansion optparse.pyc
argparse.pyc os.pyc
ast.pyc _osx_support.pyc
asyncio packaging
base64.pyc pathlib.pyc
bdb.pyc pdb.pyc
bisect.pyc pickle.pyc
bz2.pyc pkg_resources
calendar.pyc pkgutil.pyc
cmd.pyc platform.pyc
codeop.pyc plistlib.pyc
code.pyc posixpath.pyc
_compat_pickle.pyc pprint.pyc
_compression.pyc psutil
concurrent _py_abc.pyc
configparser.pyc py_compile.pyc
contextlib.pyc _pydecimal.pyc
contextvars.pyc pydoc_data
copy.pyc pydoc.pyc
csv.pyc queue.pyc
ctypes quopri.pyc
curses random.pyc
dataclasses.pyc runpy.pyc
datetime.pyc secrets.pyc
decimal.pyc selectors.pyc
difflib.pyc shlex.pyc
dis.pyc shutil.pyc
distutils signal.pyc
doctest.pyc socket.pyc
dummy_threading.pyc socketserver.pyc
_dummy_thread.pyc ssl.pyc
email stat.pyc
fnmatch.pyc stringprep.pyc
ftplib.pyc string.pyc
__future__.pyc _strptime.pyc
genericpath.pyc subprocess.pyc
getopt.pyc _sysconfigdata__linux_x86_64-linux-gnu.pyc
getpass.pyc sysconfig.pyc
gettext.pyc tarfile.pyc
glob.pyc tempfile.pyc
gzip.pyc textwrap.pyc
hashlib.pyc _threading_local.pyc
hmac.pyc threading.pyc
html tokenize.pyc
http token.pyc
importlib tracemalloc.pyc
imp.pyc tty.pyc
inspect.pyc typing.pyc
json unittest
logging urllib
lzma.pyc uuid.pyc
mimetypes.pyc uu.pyc
multiprocessing webbrowser.pyc
netrc.pyc xml
ntpath.pyc xmlrpc
nturl2path.pyc yaml
numbers.pyc zipfile.pyc
numpy zipimport.pyc
opcode.pyc
yaml:
_yaml.cpython-38-x86_64-linux-gnu.so
Neither lib mpi nor boost apear in the root of the archive
Fix
We pin pyinstaller dependency at 4.3.
We could try to understand pyinstaller behaviour, but we would still have different version between plateforms. Give the difference in behaviour it is best to pin a common version.