Build_Atchem2.sh - make sharedlib issue
baongocthai opened this issue · 10 comments
Hi all,
When I tried to run the Build_Atchem2.sh using the following command:
./build_atchem2.sh mcm/mechanism_test.fac model/configuration/ mcm/
The following log appears:
_* facsimile mechanism file: mcm/mechanism_test.fac
- fortran mechanism directory [ default = ./model/configuration/ ]: model/configuration/
- mcm data files directory [ default = ./mcm/ ]: mcm/
call mech_converter.py
/home/nus/Documents/Atchem2/AtChem2-1.2/mcm
Running fix_fac_file on /home/nus/Documents/Atchem2/AtChem2-1.2/mcm/mechanism_test.fac
/home/nus/Documents/Atchem2/AtChem2-1.2/mcm/mechanism_test.fac: file read in 255 items
0 corrections made - now removing old
Reading input file
looping over inputted RO2s
adding RO2 to model/configuration//mechanism.ro2
make sharedlib model/configuration/
make: *** No rule to make target 'sharedlib'. Stop._
Could you advise on how to solve the problem with sharedlib?
Thanks!
@baongocthai are you running the build_atchem2.sh script from the main directory or from the build/ directory?
Hi @rs028 , thanks for the guide!! I managed to resolved the problem by looking at your response!
Hi all,
When I tried to run the Build_Atchem2.sh using the following command:
./build/build_atchem2.sh model_1/mechanism_test.fac model_1/configuration/ mcm/
-
facsimile mechanism file: model_1/mechanism_test.fac
-
fortran mechanism directory [ default = ./model/configuration/ ]: model_1/configuration/
-
mcm data files directory [ default = ./mcm/ ]: mcm/
call mech_converter.py
/Users/tanzinaakther/Desktop/AtChem2/model_1
Running fix_fac_file on /Users/tanzinaakther/Desktop/AtChem2/model_1/mechanism_test.fac
/Users/tanzinaakther/Desktop/AtChem2/model_1/mechanism_test.fac: file read in 255 items
0 corrections made - now removing old
Reading input file
looping over inputted RO2s
adding RO2 to model_1/configuration//mechanism.ro2
make sharedlib model_1/configuration/
make: *** No rule to make target `sharedlib'. Stop.
Not sure how to solve this. It's a similar problem like @baongocthai.
Hi @morshedahmed17, the problem of @baongocthai was launching the build script from within the build/ directory, instead of the main directory. Is this is your case?
I am running it from the source directory.
./build/build_atchem2.sh model_1/mechanism_test.fac model_1/configuration/ mcm/
Getting the same error message. Please see the attached image also.
Are you able to compile the test mechanism and run the tests? See the manual at the end of the installation section,
Hello,
The test runs are showing errors. Please see the attached.
I would say that something is wrong with your dependencies or the paths. Can you try to reinstall everything, maybe on a different machine if possible?
@morshedahmed17 did you solve the problem? Have you tried the development version (https://github.com/AtChem/AtChem2/archive/refs/heads/master.zip) instead of one of the releases?
I have solved the problem. I tried with my university cluster and it worked. Thanks