BCCDC-PHL/kma-cgmlst

Issues

• Add support for long reads

  #26 opened 4 months ago by dfornika
  0

• Failed to create symbolic link

  #25 opened 8 months ago by idolawoye
  0

• Error 14: Bad Address

  #24 opened 8 months ago by idolawoye
  0

• Add GitHub Actions-based testing workflow

  #23 opened 9 months ago by dfornika
  0

• Add provenance

  #21 opened 10 months ago by dfornika
  0

• fastp csv files are tsv formatted

  #19 opened 10 months ago by dfornika
  0

• Add `collect_outputs` and `collected_outputs_prefix` params

  #17 opened 10 months ago by dfornika
  0

• Remove `versioned_outdir` param

  #16 opened 10 months ago by dfornika
  0

• please add a license

  #15 opened 10 months ago by mcroxen
  1

• Include kma `.mapstat` file in output

  #13 opened 2 years ago by dfornika
  0

• Some kma result lines excluded during csv cleanup

  #11 opened 2 years ago by dfornika
  0

• Add parameters for allele coverage and identity

  #9 opened 2 years ago by dfornika
  0

• Mismatch between output of `kma_result_to_mlst` and input of `count_called_alleles`

  #7 opened 3 years ago by dfornika
  0

• Add optional versioned output directory

  #3 opened 3 years ago by dfornika
  0

• Samplesheet input mode

  #4 opened 3 years ago by dfornika
  0

• Pipeline fails with error 'no space left on device'

  #1 opened 3 years ago by dfornika
  0