Add support for `History Entries`, `Workspace`, and `Date` files.
Opened this issue · 2 comments
ViridianForge commented
Recent workflows have turned up MFFs that contain the above three file types. With the goal of having mffpy
support all aspects of the MFF standard - we should work on supporting these file components.
ephathaway commented
In the interest of determining if an MFF is continuous, segmented, or averaged, I will begin implementing parsing of histroy.xml
files. Here are example contents of one such file:
<?xml version="1.0" encoding="UTF-8" standalone="yes" ?>
<historyEntries xmlns="http://www.egi.com/history_mff" xmlns:xsi="http://www.w3.org/2001/XMLSchema-instance">
<entry>
<tool>
<name>example</name>
<method>Segmentation</method>
<version>5.4.3-R</version>
<beginTime>2020-08-27T13:32:26.008693-07:00</beginTime>
<endTime>2020-08-27T13:32:26.113988-07:00</endTime>
<sourceFiles>
<filePath type="" creator="">/Users/egi/Desktop/RM271_noise_test_20190501_105754.mff</filePath>
</sourceFiles>
<settings>
<setting> 1: Rules for category "Category A"</setting>
<setting> Milliseconds Before: 10</setting>
<setting> Milliseconds After: 10</setting>
<setting> Milliseconds Offset: 0</setting>
<setting> Event 1:</setting>
<setting> Label is "Spike 1"</setting>
<setting> 2: Rules for category "Category B"</setting>
<setting> Milliseconds Before: 10</setting>
<setting> Milliseconds After: 10</setting>
<setting> Milliseconds Offset: 0</setting>
<setting> Event 1:</setting>
<setting> Label is "Spike 2"</setting>
<setting> 3: Rules for category "Category C"</setting>
<setting> Milliseconds Before: 10</setting>
<setting> Milliseconds After: 10</setting>
<setting> Milliseconds Offset: 0</setting>
<setting> Event 1:</setting>
<setting> Label is "Spike 3"</setting>
</settings>
<results>
<result>Segmented to 3 categories and 9 segments</result>
<result> 1 : "Category A" has 3 segments</result>
<result> 2 : "Category B" has 3 segments</result>
<result> 3 : "Category C" has 3 segments</result>
</results>
</tool>
</entry>
<entry>
<tool>
<name>example_averaging</name>
<method>Averaging</method>
<version>5.4.3-R</version>
<beginTime>2020-08-27T13:33:08.945341-07:00</beginTime>
<endTime>2020-08-27T13:33:09.006109-07:00</endTime>
<sourceFiles>
<filePath>/Users/egi/Desktop/RM271_noise_test_20190501_105754_seg.mff</filePath>
</sourceFiles>
<settings>
<setting>Handle source files together</setting>
<setting>Subjects are not averaged together.</setting>
</settings>
<results>
<result>Subjects processed</result>
<result>RM271_noise_test</result>
<result> 1: 'Category A' has 1 segments.</result>
<result> 2: 'Category B' has 1 segments.</result>
<result> 3: 'Category C' has 1 segments.</result>
</results>
</tool>
</entry>
</historyEntries>
ephathaway commented
History Entries are now supported.