Pinned Repositories
coalescent-theory
NOT FREE SOFTWARE UNTIL AFTER MAY
convCal
Python scripts for calculation of expected number of convergence in Zou and Zhang 2015
Coursera-Bioinformatics
My solution to Bioinformatics Specialization (Finding Hidden Messages in DNA; Genome Sequencing; Comparing Genes, Proteins, and Genomes; Molecular Evolution; Genomic Data Science and Clustering; Finding Mutations in DNA and Proteins; Bioinformatics Capstone: Big Data in Biology)
GenomicPipelines
scripts writed during PHD
HMM
隐马尔科夫模型进行中文分词 python
MCMC
Collection of Monte Carlo (MC) and Markov Chain Monte Carlo (MCMC) algorithms applied on simple examples.
Positive_selection
Scripts for running codeml (from PAML package)
positiveSelectionPipeline
Random perl and shell scripts plus notes for whole genome CDS positive selection detection
prob140-textbook-zh
:book: [译] 面向数据科学的概率论
ThinkBayes
Code repository for Think Bayes.
BIGtigr's Repositories
BIGtigr/GenomicPipelines
scripts writed during PHD
BIGtigr/pyCircos
python Circos
BIGtigr/2019_Puller_SiteSpecificGTR
BIGtigr/Awesome-Hacking
A collection of various awesome lists for hackers, pentesters and security researchers
BIGtigr/BrainZoo
Scripts used in brain mCH manuscript
BIGtigr/CellChat
R toolkit for inference, visualization and analysis of cell-cell communication from single-cell data
BIGtigr/ChIP-seq-analysis
ChIP-seq analysis notes from Ming Tang
BIGtigr/ChIPseeker
:dart: ChIP peak Annotation, Comparison and Visualization
BIGtigr/CNEFinder
CNEFinder: Finding Conserved Non-coding Elements in Genomes
BIGtigr/CORSID
TRS and gene identifier
BIGtigr/DuckGenome
BIGtigr/edyeet
base-accurate DNA sequence alignments using edlib and mashmap2
BIGtigr/encode_dna_dynamics
Custom scripts used in "Spatiotemporal DNA Methylome Dynamics of the Developing Mammalian Fetus"
BIGtigr/fingeRNAt
Software for calculating Structural Interaction Fingerprints (SIFs) in nucleic acids - ligands complexes.
BIGtigr/FitnessInference
Prediction fitness of leaves on a genealogical tree
BIGtigr/ggpubr
'ggplot2' Based Publication Ready Plots
BIGtigr/GSEApy
Gene Set Enrichment Analysis in Python
BIGtigr/hcoErosions
BIGtigr/kakebeen-et-al-2020
BIGtigr/multipy
Multiple hypothesis testing in Python
BIGtigr/mummer2circos
Circular bacterial genome plots based on BLAST or NUCMER/PROMER alignments
BIGtigr/pdfGPT
PDF GPT allows you to chat with the contents of your PDF file by using GPT capabilities. The most effective open source solution to turn your pdf files in a chatbot!
BIGtigr/PPGfinder
Discover processed pseudogene from long structural variations.
BIGtigr/Python-100-Days
Python - 100天从新手到大师
BIGtigr/starbeast3
BIGtigr/stringtie
Transcript assembly and quantification for RNA-Seq
BIGtigr/SweepVersusTraitOptimum
SweepVsTraitOptimum
BIGtigr/SYSU_Notebook
本项目分享了本人在中山大学数据科学与计算机学院计算机科学专业的课程资料、笔记、回忆和整理的期末考试卷、及课程作业。希望对你们有所帮助❤️，如果喜欢记得给个star哦🌟
BIGtigr/VirSorter2
customizable pipeline to identify viral sequences from (meta)genomic data
BIGtigr/wfmash
base-accurate DNA sequence alignments using WFA and mashmap2