Bigelow Laboratory for Ocean Sciences

East Boothbay, ME

Pinned Repositories

dismotools
R: extra tools for the raster and dismo packages.
Language:R3 15 41
fvcom
Convenience tools for accessing FVCOM datasets.
Language:R5 5 91
gorg-classifier
Produce taxonomic and functional annotations of shotgun metagenomes, metatranscriptomes and metaproteome sequences.
Language:Nextflow4 5 110
iceout
Provides convenient access to New England iceout data from \url{https://me.water.usgs.gov/iceout_data}.
Language:R4 4 11
maree
An R wrapper around a local install of xtide
Language:R3 4 10
ndfd
A RESTful R interface to the NWS National Digital Forecast Database
Language:R5 5 10
obpgcrawler
A limited THREDDS crawler for programmatically working with the OpeNDAP data offerings from http://oceandata.sci.gsfc.nasa.gov/opendap/
Language:R4 15 12
spnc
A simplified interface between spatial classes and NetCDF data sources.
Language:R4 16 00
thredds
THREDDS Crawler for R using xml2 package
Language:R6 5 51
threddscrawler
A generic THREDDS crawler for R
Language:R4 13 02

Bigelow Laboratory for Ocean Sciences's Repositories

BigelowLab/thredds
THREDDS Crawler for R using xml2 package
Language:R6 5 51
BigelowLab/fvcom
Convenience tools for accessing FVCOM datasets.
Language:R5 5 91
BigelowLab/topotools
R tools for use topography/bathymetry datasets.
Language:R2 4 2
BigelowLab/cofbb
Center for Ocean Forecasting spatial bounding boxes
Language:R1 3 0
BigelowLab/genologicsr
API wrapper for GLS API v2
Language:R1 10 5
BigelowLab/gom-series
Language:HTML1 2 134
BigelowLab/pspforecast
Maine shellfish toxicity forecast serving package
Language:R1 3 11
BigelowLab/GORG-HGT-bioinfo
Language:Jupyter Notebook0 2 00
BigelowLab/2024-07-08-wph-online
Language:HTML
BigelowLab/brickman
R package to access Brickman 2055 and 2075 datasets
Language:R3 8
BigelowLab/charlier
A small set of R tools to make working on `charlie` with worklows a little easier.
Language:R4 1
BigelowLab/cprdata
R language tools for working Continuous Plankton Recorder (CPR) data
Language:R2 3
BigelowLab/emolt
Access eMOLT data from within R
BigelowLab/gfwdata
R language tools to manage Global Fishing Watch data
Language:R2 2
BigelowLab/gstream
R language package to serve Gulf Stream realated data
Language:R1 11
BigelowLab/gstream-climatology
Gulf Stream climatology
Language:R2 01
BigelowLab/handytandy
Handy Tandy Reference Pages
Language:R2 11
BigelowLab/maxnetic
Supplementary tools for extending the maxnet package.
Language:R2 11
BigelowLab/mednaTaxaRef
Development of an R toolset to generate reference databases for use in Maine-eDNA sequence analyses based on merging existing functionalities
Language:R0 0
BigelowLab/nbs
An R package to access NOAA NCEI Blended Seawinds (NBS v2)
Language:R2 2
BigelowLab/nerddap
R tools for easy access to NERACOOS ERDDAP server
Language:R2 01
BigelowLab/oceancolour
Easy R access to OceanColor.org data via OPeNDAP
Language:R
BigelowLab/plateLayout
R tools for working with plate (tray) layout definitions in LIMS.
Language:R10 0
BigelowLab/refdbtools
R language package to assist in making eDNA reference databases
Language:R2 0
BigelowLab/referee
Scripts for building reference databases
Language:R4 31
BigelowLab/restez
:sleeping: :open_file_folder: Create and Query a Local Copy of GenBank in R
Language:R0 0
BigelowLab/sf
Simple Features for R
Language:R1 0
BigelowLab/shiny-habodj
Interactive harmful algal bloom ocean data justice analysis explorer
Language:R1 1
BigelowLab/stars
Spatiotemporal Arrays, Raster and Vector Data Cubes
Language:R1 0
BigelowLab/tcof-reporter
Daily Data Reporter
Language:R2 0