BioJulia/BioAlignments.jl

`AlignmentAnchor` method signature

CiaranOMara opened this issue · 1 comments

CiaranOMara commented

The following was caught as an unrelated error in a BGZFStreams.jl downstream test.

MethodError: no method matching AlignmentAnchor(::Int64, ::Int64, ::BioAlignments.Operation)
[243](https://github.com/BioJulia/BGZFStreams.jl/runs/5163487858?check_suite_focus=true#step:6:243)
  Closest candidates are:
[244](https://github.com/BioJulia/BGZFStreams.jl/runs/5163487858?check_suite_focus=true#step:6:244)
    AlignmentAnchor(::Any, ::Any, ::Any, ::Any) at ~/.julia/packages/BioAlignments/EyHqv/src/anchors.jl:13
[245](https://github.com/BioJulia/BGZFStreams.jl/runs/5163487858?check_suite_focus=true#step:6:245)
    AlignmentAnchor(::Int64, ::Int64, ::Int64, ::BioAlignments.Operation) at ~/.julia/packages/BioAlignments/EyHqv/src/anchors.jl:13

Let us yank v2.0.1 and v2.1.0 of BioAlignments at JuliaRegistries/General.

Then I think the easiest fix is to go straight to v3, or we would need to resupply the v2 method signature AlignmentAnchor(::Int64, ::Int64, ::BioAlignments.Operation) and tag as v2.1.1.

Edited for clarity.
kescobo commented

just for reference, v2.0.1 actually isn't in the general registry, it was rejected because it includes narrowing the supported julia versions. But I had tagged it for Zenodo to fix #65

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