Pinned Repositories
CALISTA
CALISTA: Clustering And Lineage Inference in Single Cell Transcriptional Analysis
CrossTx
CrossTx: Cross-cell line Transcriptomic Signature Predictions
DeltaFBA
DeltaFBA is a set of MATLAB functions that employs constraint-based modeling, in combination with differential gene expression data, to evaluate changes in the intracellular flux distribution between two conditions.
DeltaNet
DeltaNet is a network analysis tool for predicting genetic perturbations from gene expression data.
DeltaNeTS
A repository of DeltaNeTS packages
DeltaNeTSplus
FARCI
ProTINA
SINCERITIES
SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression profiles.
TRaCE
Transitive Reduction and Closure Ensemble
CABSEL's Repositories
CABSEL/SINCERITIES
SINCERITIES is a tool for inferring gene regulatory networks from time-stamped cross-sectional single cell transcriptional expression profiles.
CABSEL/CALISTA
CALISTA: Clustering And Lineage Inference in Single Cell Transcriptional Analysis
CABSEL/ProTINA
CABSEL/DeltaFBA
DeltaFBA is a set of MATLAB functions that employs constraint-based modeling, in combination with differential gene expression data, to evaluate changes in the intracellular flux distribution between two conditions.
CABSEL/CrossTx
CrossTx: Cross-cell line Transcriptomic Signature Predictions
CABSEL/DeltaNeTSplus
CABSEL/FARCI
CABSEL/TRaCE
Transitive Reduction and Closure Ensemble
CABSEL/calista-doc
Documentation files for CALISTA
CABSEL/calista_example_data
datasets used for testing calista
CABSEL/calista_R_old_v1.0.2
Old R version of CALISTA
CABSEL/Connectome-Rewiring
CABSEL/DeltaNet
DeltaNet is a network analysis tool for predicting genetic perturbations from gene expression data.
CABSEL/DeltaNeTS
A repository of DeltaNeTS packages
CABSEL/Mitochondrial-DNA-Deletion-Breakpoints-Analysis
CABSEL/REDEMPTION
Reduced Dimension Ensemble Modeling and Parameter Estimation
CABSEL/REDUCE
REDUCE is an algorithm for optimal design of gene knock-out (KO) for the purpose of gene regulatory network (GRN) inference.
CABSEL/GFA
Glycosylation Flux Analysis
CABSEL/glycoTS