Fix output csv writing in patch_manager
Closed this issue · 2 comments
katesedykh commented
If you have several input images and use function mine_patches, the header will be added to csv file for each one. Check if file is empty or header is already there.
grenkoca commented
Thank you for your feedback @katesedykh. We recently merged some changes (See: PR #17) to resolve this issue, and hopefully they should work. Could you update your version of OPM to development using the following commands:
git clone https://github.com/CBICA/OPM.git
cd OPM/
conda create -p ./venv python=3.8.12 -y
conda activate ./venv
pip install .
Then try running your command again. If that doesn't work, it would be helpful if you could share the code/command you're using so we can reproduce the issue.
Thank you!
Caleb
grenkoca commented
Closing this thread as we patched and got no response