speed up analyses (particularly clustering)
andrewheusser opened this issue · 0 comments
andrewheusser commented
The clustering scores can take a while to compute when correcting with permutation tests. We already have a parallelized solution over analysis 'chunks' by setting parallel=True
. Two ways to speed this up are:
-
optimize the multiprocessing code (may not be implemented in the most efficient way)
-
deriving an analytic solution to correct the clustering scores instead of relying on permutations