A Framework for small RNA analysis in R using Sequence-Based Counts
We are sad to inform that the main developer of Seqpac - Daniel Nätt - passed away in April of 2023.
If any issues or questions regarding Seqpac has occured and remains unanswered, please contact Signe Skog (signe.skog@liu.se) for assistance. We are working on getting develpoment back on track and to go through issues.
In R:
devtools::install_github("Danis102/seqpac", dependencies=TRUE)
OR
BiocManager::install("seqpac")
A guide to sRNA analysis using sequence-based counts
Seqpac: A Framework for small RNA analysis in R using Sequence-Based Counts
Signe Skog, Lovisa Örkenby, Unn Kugelberg, Anita Öst, Daniel Nätt
Bioinformatics, Volume 39, Issue 4, April 2023, btad144, https://doi.org/10.1093/bioinformatics/btad144
Seqpac: A New Framework for small RNA analysis in R using Sequence-Based Counts