Replace ete3 with plotly

Question

Replace ete3 with plotly

Closed this issue 2 years ago · 4 comments

The current library used for visualizing trees is ete3, this library has a couple of dependency issues that is making it difficult to run. It's also not really optimized for our use case, but for phylogenetic trees while plotly is for general datasets.

My goal is to remove the ete3 dependency and replace it with plotly as the underlying tree plotting framework for the LinkTree

Answer 1 · 2023-01-01T21:44:45.000Z

Another option https://github.com/pydot/pydot

Answer 2 · 2023-01-01T23:56:49.000Z

Another option https://treelib.readthedocs.io/en/latest/

Answer 3 · 2023-01-10T07:22:59.000Z

@KingAkeem I think this is a duplicate of #256

Answer 4 · 2023-01-10T12:12:32.000Z

I never saw that issue, but either way it's completed so I'll close this