Can't install on Apple M1 chip
smortezah opened this issue · 13 comments
Trying to install on Apple M1 chip, it throws "wrong architecture" error.
I have a different error when running pip install MulticoreRSNE:
Building wheel for MulticoreTSNE (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /opt/homebrew/opt/python@3.9/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/setup.py'"'"'; file='"'"'/private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-wheel-2vay8_aj
cwd: /private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/
Complete output (28 lines):
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-12-arm64-3.9
creating build/lib.macosx-12-arm64-3.9/MulticoreTSNE
copying MulticoreTSNE/init.py -> build/lib.macosx-12-arm64-3.9/MulticoreTSNE
creating build/lib.macosx-12-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/init.py -> build/lib.macosx-12-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/test_base.py -> build/lib.macosx-12-arm64-3.9/MulticoreTSNE/tests
running egg_info
writing MulticoreTSNE.egg-info/PKG-INFO
writing dependency_links to MulticoreTSNE.egg-info/dependency_links.txt
writing requirements to MulticoreTSNE.egg-info/requires.txt
writing top-level names to MulticoreTSNE.egg-info/top_level.txt
listing git files failed - pretending there aren't any
reading manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.txt'
writing manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
running build_ext
cmake version 3.21.4
CMake suite maintained and supported by Kitware (kitware.com/cmake).
CMake Error: Unknown argument --
CMake Error: Run 'cmake --help' for all supported options.
ERROR: Cannot generate Makefile. See above errors.
ERROR: Failed building wheel for MulticoreTSNE
Running setup.py clean for MulticoreTSNE
Failed to build MulticoreTSNE
Installing collected packages: MulticoreTSNE
DEPRECATION: Configuring installation scheme with distutils config files is deprecated and will no longer work in the near future. If you are using a Homebrew or Linuxbrew Python, please see discussion at Homebrew/homebrew-core#76621
Running setup.py install for MulticoreTSNE ... error
ERROR: Command errored out with exit status 1:
command: /opt/homebrew/opt/python@3.9/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/setup.py'"'"'; file='"'"'/private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-record-zs84f693/install-record.txt --single-version-externally-managed --compile --install-headers /opt/homebrew/include/python3.9/MulticoreTSNE
cwd: /private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/
Complete output (30 lines):
running install
/opt/homebrew/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
creating build
creating build/lib.macosx-12-arm64-3.9
creating build/lib.macosx-12-arm64-3.9/MulticoreTSNE
copying MulticoreTSNE/init.py -> build/lib.macosx-12-arm64-3.9/MulticoreTSNE
creating build/lib.macosx-12-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/init.py -> build/lib.macosx-12-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/test_base.py -> build/lib.macosx-12-arm64-3.9/MulticoreTSNE/tests
running egg_info
writing MulticoreTSNE.egg-info/PKG-INFO
writing dependency_links to MulticoreTSNE.egg-info/dependency_links.txt
writing requirements to MulticoreTSNE.egg-info/requires.txt
writing top-level names to MulticoreTSNE.egg-info/top_level.txt
listing git files failed - pretending there aren't any
reading manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.txt'
writing manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
running build_ext
cmake version 3.21.4
CMake suite maintained and supported by Kitware (kitware.com/cmake).
CMake Error: Unknown argument --
CMake Error: Run 'cmake --help' for all supported options.
ERROR: Cannot generate Makefile. See above errors.
----------------------------------------
ERROR: Command errored out with exit status 1: /opt/homebrew/opt/python@3.9/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/setup.py'"'"'; file='"'"'/private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-install-wgg624pd/multicoretsne_3ce9ee427adb41349f64f2af4866a3aa/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/var/folders/mr/8qybn91j5fgdbrcdmq7ckftw0000gn/T/pip-record-zs84f693/install-record.txt --single-version-externally-managed --compile --install-headers /opt/homebrew/include/python3.9/MulticoreTSNE Check the logs for full command output.
No idea how to fix it.
Thanks,
Jianshu
I have the same problem on my M1 Macbook with anaconda miniforge.
pip install MulticoreTSNE
Output:
`pip install MulticoreTSNE 1 х │ 11s │ env_tensorflow Py │ 12:27:11
Collecting MulticoreTSNE
Using cached MulticoreTSNE-0.1.tar.gz (20 kB)
Preparing metadata (setup.py) ... done
Requirement already satisfied: numpy in /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/lib/python3.9/site-packages (from MulticoreTSNE) (1.22.1)
Requirement already satisfied: cffi in /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/lib/python3.9/site-packages (from MulticoreTSNE) (1.15.0)
Requirement already satisfied: pycparser in /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/lib/python3.9/site-packages (from cffi->MulticoreTSNE) (2.21)
Building wheels for collected packages: MulticoreTSNE
Building wheel for MulticoreTSNE (setup.py) ... error
ERROR: Command errored out with exit status 1:
command: /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/setup.py'"'"'; file='"'"'/private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' bdist_wheel -d /private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-wheel-4igemkjv
cwd: /private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/
Complete output (27 lines):
running bdist_wheel
running build
running build_py
creating build
creating build/lib.macosx-11.0-arm64-3.9
creating build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE
copying MulticoreTSNE/init.py -> build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE
creating build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/init.py -> build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/test_base.py -> build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE/tests
running egg_info
writing MulticoreTSNE.egg-info/PKG-INFO
writing dependency_links to MulticoreTSNE.egg-info/dependency_links.txt
writing requirements to MulticoreTSNE.egg-info/requires.txt
writing top-level names to MulticoreTSNE.egg-info/top_level.txt
reading manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.txt'
writing manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
running build_ext
cmake version 3.22.2
CMake suite maintained and supported by Kitware (kitware.com/cmake).
CMake Error: Unknown argument --
CMake Error: Run 'cmake --help' for all supported options.
ERROR: Cannot generate Makefile. See above errors.
ERROR: Failed building wheel for MulticoreTSNE
Running setup.py clean for MulticoreTSNE
Failed to build MulticoreTSNE
Installing collected packages: MulticoreTSNE
Running setup.py install for MulticoreTSNE ... error
ERROR: Command errored out with exit status 1:
command: /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/setup.py'"'"'; file='"'"'/private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-record-odgm4fvk/install-record.txt --single-version-externally-managed --compile --install-headers /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/include/python3.9/MulticoreTSNE
cwd: /private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/
Complete output (29 lines):
running install
/opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/lib/python3.9/site-packages/setuptools/command/install.py:34: SetuptoolsDeprecationWarning: setup.py install is deprecated. Use build and pip and other standards-based tools.
warnings.warn(
running build
running build_py
creating build
creating build/lib.macosx-11.0-arm64-3.9
creating build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE
copying MulticoreTSNE/init.py -> build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE
creating build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/init.py -> build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE/tests
copying MulticoreTSNE/tests/test_base.py -> build/lib.macosx-11.0-arm64-3.9/MulticoreTSNE/tests
running egg_info
writing MulticoreTSNE.egg-info/PKG-INFO
writing dependency_links to MulticoreTSNE.egg-info/dependency_links.txt
writing requirements to MulticoreTSNE.egg-info/requires.txt
writing top-level names to MulticoreTSNE.egg-info/top_level.txt
reading manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
reading manifest template 'MANIFEST.in'
adding license file 'LICENSE.txt'
writing manifest file 'MulticoreTSNE.egg-info/SOURCES.txt'
running build_ext
cmake version 3.22.2
CMake suite maintained and supported by Kitware (kitware.com/cmake).
CMake Error: Unknown argument --
CMake Error: Run 'cmake --help' for all supported options.
ERROR: Cannot generate Makefile. See above errors.
----------------------------------------
ERROR: Command errored out with exit status 1: /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/bin/python3.9 -u -c 'import io, os, sys, setuptools, tokenize; sys.argv[0] = '"'"'/private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/setup.py'"'"'; file='"'"'/private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-install-qhcyvm81/multicoretsne_309fe319d0ab455e8ddf77fe14158648/setup.py'"'"';f = getattr(tokenize, '"'"'open'"'"', open)(file) if os.path.exists(file) else io.StringIO('"'"'from setuptools import setup; setup()'"'"');code = f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, file, '"'"'exec'"'"'))' install --record /private/var/folders/3m/s8wmrd5s1vsd0p7s_qpnlmr80000gn/T/pip-record-odgm4fvk/install-record.txt --single-version-externally-managed --compile --install-headers /opt/homebrew/Caskroom/miniforge/base/envs/env_tensorflow/include/python3.9/MulticoreTSNE Check the logs for full command output.`
same issue here on MacBook Pro, even if I use "pip3 install cmake==3.18.4".
Same issue
CMake Error: Unknown argument --
This has to be the most ridiculous problem I have ever seen while compiling a package...
I also had this error on my Mac and couldn't understand why. A simple cmake --help solved it.
The problem comes from the fact that the cmake command requires -S to be used during the build to point to the source path. So to correct this on Mac, simply modify the line 55 of "setyp.py" and replace '--' to '-S'. The package should compile withouth any error after that.
@b-y-f , @wjyzidane , @jianshu93 , @EmanuelCastanho , @ladcva Hope this helps you :)
Many thanks！
Jianshu