Ecogenomics/APP

Issues

• Merged database versions

  #17 opened 11 years ago by fangly
  1

• APP does not enforce unique IDs

  #16 opened 11 years ago by fangly
  0

• use platform-independent chomping of input files

  #15 opened 12 years ago by wwood
  0

• Removal of spaces in taxonomic strings

  #14 opened 12 years ago by fangly
  0

• Waste of CPU

  #13 opened 12 years ago by fangly
  0

• APP should log to a file in the output folder, as well as to STDOUT

  #12 opened 12 years ago by wwood
  0

• app_make_results.pl custom databases not working

  #11 opened 12 years ago by ctSkennerton
  1

• Error with APP 2.3.3

  #3 opened 12 years ago by fangly
  3

• Skip beta diversity analyses when there is a single sample

  #8 opened 12 years ago by fangly
  1

• app_otu_to_krona.pl is broken

  #10 opened 12 years ago by ctSkennerton
  1

• Sanity checking - number of reads after split_libraries

  #7 opened 12 years ago by fangly
  1

• usearch threads are hard coded

  #1 opened 12 years ago by Askars
  0

• FASTA file lookup too narrow

  #6 opened 12 years ago by fangly
  1

• Bug in table based normalization with custom databases

  #9 opened 12 years ago by ctSkennerton
  0

• Option to make up quality scores

  #2 opened 12 years ago by fangly
  1

• Resuming app_make_results

  #5 opened 12 years ago by fangly
  0

• app_combine forgets configuration

  #4 opened 12 years ago by fangly
  0