FHIR/fhir.js

NPM install fails on OSX 10.11.6 with Node 6.4

kkotak opened this issue · 3 comments

$ npm install fhir

libxmljs@0.14.3 install /Users/macbook/Documents/xx-server/node_modules/fhir/node_modules/libxmljs
node-gyp rebuild

CC(target) Release/obj.target/libxml/vendor/libxml/buf.o
CC(target) Release/obj.target/libxml/vendor/libxml/catalog.o
CC(target) Release/obj.target/libxml/vendor/libxml/chvalid.o
CC(target) Release/obj.target/libxml/vendor/libxml/dict.o
CC(target) Release/obj.target/libxml/vendor/libxml/encoding.o
CC(target) Release/obj.target/libxml/vendor/libxml/entities.o
CC(target) Release/obj.target/libxml/vendor/libxml/error.o
CC(target) Release/obj.target/libxml/vendor/libxml/globals.o
CC(target) Release/obj.target/libxml/vendor/libxml/hash.o
CC(target) Release/obj.target/libxml/vendor/libxml/HTMLparser.o
CC(target) Release/obj.target/libxml/vendor/libxml/HTMLtree.o
CC(target) Release/obj.target/libxml/vendor/libxml/legacy.o
CC(target) Release/obj.target/libxml/vendor/libxml/list.o
CC(target) Release/obj.target/libxml/vendor/libxml/parser.o
../vendor/libxml/parser.c:13492:43: warning: passing 'const xmlChar ' (aka 'const unsigned char *') to parameter of type 'const char *' converts between pointers to
integer types with different sign [-Wpointer-sign]
hdlr = xmlFindCharEncodingHandler(doc->encoding);
^~~~~~~~~~~~~
../vendor/libxml/include/libxml/encoding.h:175:42: note: passing argument to parameter 'name' here
xmlFindCharEncodingHandler (const char *name);
^
1 warning generated.
CC(target) Release/obj.target/libxml/vendor/libxml/parserInternals.o
CC(target) Release/obj.target/libxml/vendor/libxml/pattern.o
CC(target) Release/obj.target/libxml/vendor/libxml/relaxng.o
CC(target) Release/obj.target/libxml/vendor/libxml/SAX2.o
CC(target) Release/obj.target/libxml/vendor/libxml/SAX.o
CC(target) Release/obj.target/libxml/vendor/libxml/tree.o
CC(target) Release/obj.target/libxml/vendor/libxml/threads.o
CC(target) Release/obj.target/libxml/vendor/libxml/uri.o
CC(target) Release/obj.target/libxml/vendor/libxml/valid.o
CC(target) Release/obj.target/libxml/vendor/libxml/xinclude.o
CC(target) Release/obj.target/libxml/vendor/libxml/xlink.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlIO.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlmemory.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlmodule.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlreader.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlregexp.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlsave.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlschemas.o
../vendor/libxml/xmlschemas.c:24203:10: warning: explicitly assigning value of variable of type 'xmlSchemaValType' to itself [-Wself-assign]
valType = valType;
~~~~~~~ ^ ~~~~~~~
1 warning generated.
CC(target) Release/obj.target/libxml/vendor/libxml/xmlschemastypes.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlstring.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlunicode.o
CC(target) Release/obj.target/libxml/vendor/libxml/xmlwriter.o
CC(target) Release/obj.target/libxml/vendor/libxml/xpath.o
../vendor/libxml/xpath.c:12402:13: warning: comparison of constant 'XML_NAMESPACE_DECL' (18) with expression of type 'xmlXPathTypeVal' is always false
[-Wtautological-constant-out-of-range-compare]
if (type == XML_NAMESPACE_DECL)
~~~~ ^ ~~~~~~~~~~~~~~~~~~
In file included from ../vendor/libxml/xpath.c:185:
../vendor/libxml/trionan.c:194:1: warning: unused function 'trio_is_special_quantity' [-Wunused-function]
trio_is_special_quantity
^
../vendor/libxml/trionan.c:218:1: warning: unused function 'trio_is_negative' [-Wunused-function]
trio_is_negative
^
3 warnings generated.
CC(target) Release/obj.target/libxml/vendor/libxml/xpointer.o
LIBTOOL-STATIC Release/xml.a
CXX(target) Release/obj.target/xmljs/src/libxmljs.o
In file included from ../src/libxmljs.cc:7:
In file included from ../src/libxmljs.h:7:
../node_modules/nan/nan.h:592:20: error: no type named 'GCEpilogueCallback' in 'v8::Isolate'
v8::Isolate::GCEpilogueCallback callback
~~~~~~~~~~~~~^
../node_modules/nan/nan.h:598:20: error: no type named 'GCEpilogueCallback' in 'v8::Isolate'
v8::Isolate::GCEpilogueCallback callback) {
~~~~~~~~~~~~~^
../node_modules/nan/nan.h:603:20: error: no type named 'GCPrologueCallback' in 'v8::Isolate'
v8::Isolate::GCPrologueCallback callback
~~~~~~~~~~~~~^
../node_modules/nan/nan.h:609:20: error: no type named 'GCPrologueCallback' in 'v8::Isolate'
v8::Isolate::GCPrologueCallback callback) {
~~~~~~~~~~~~~^
4 errors generated.
make: *
* [Release/obj.target/xmljs/src/libxmljs.o] Error 1
gyp ERR! build error
gyp ERR! stack Error: make failed with exit code: 2
gyp ERR! stack at ChildProcess.onExit (/usr/local/lib/node_modules/npm/node_modules/node-gyp/lib/build.js:276:23)
gyp ERR! stack at emitTwo (events.js:106:13)
gyp ERR! stack at ChildProcess.emit (events.js:191:7)
gyp ERR! stack at Process.ChildProcess._handle.onexit (internal/child_process.js:204:12)
gyp ERR! System Darwin 15.6.0
gyp ERR! command "/usr/local/bin/node" "/usr/local/lib/node_modules/npm/node_modules/node-gyp/bin/node-gyp.js" "rebuild"
gyp ERR! cwd /Users/macbook/Documents/xx-server/node_modules/fhir/node_modules/libxmljs
gyp ERR! node -v v6.4.0
gyp ERR! node-gyp -v v3.3.1
gyp ERR! not ok
untitled1@0.0.0 /Users/macbook/Documents/xx-server
└── (empty)

npm ERR! Darwin 15.6.0
npm ERR! argv "/usr/local/bin/node" "/usr/local/bin/npm" "install" "fhir"
npm ERR! node v6.4.0
npm ERR! npm v3.10.3
npm ERR! code ELIFECYCLE

npm ERR! libxmljs@0.14.3 install: node-gyp rebuild
npm ERR! Exit status 1
npm ERR!
npm ERR! Failed at the libxmljs@0.14.3 install script 'node-gyp rebuild'.
npm ERR! Make sure you have the latest version of node.js and npm installed.
npm ERR! If you do, this is most likely a problem with the libxmljs package,
npm ERR! not with npm itself.
npm ERR! Tell the author that this fails on your system:
npm ERR! node-gyp rebuild
npm ERR! You can get information on how to open an issue for this project with:
npm ERR! npm bugs libxmljs
npm ERR! Or if that isn't available, you can get their info via:
npm ERR! npm owner ls libxmljs
npm ERR! There is likely additional logging output above.

npm ERR! Please include the following file with any support request:
npm ERR! /Users/macbook/Documents/xx-server/npm-debug.log
npm ERR! code 1

Can you please try npm install fhir.js? Looks like you may have omitted the ".js" in your attempt here.

(Incredibly confusingly, your command attempted -- and failed -- to install a different library: https://github.com/lantanagroup/FHIR.js)

Yes! Sorry to bother. That worked! BTW, I'm a bit confused about the various fhir.js variations. I'm new to the HL7 world. If I have an AngularJS/NodeJS framework, what's the best way to use the package? I notice that there are Bower, JQUery, Native, and other packages too.

Thanks.

Glad to hear that worked.

If you're talking to fhir servers from the frontend, try the Angular adapter or the promise based adapter. If you're talking through a node backend, try the promise based adapter.

For questions, please see http://fhir.org (chat and/or forums).