Finesim97

Finesim97's Stars

• xiaoli-dong/metaerg

  Language:Perl4218

• SFTtech/sftdyn

  Self-hosted dyndns/dynamic DNS server and updater for bind

  Language:Python25856

• epfl-vlsc/memoro

  Memoro: A Detailed Heap Profiler

  Language:CSS17916

• epfl-vlsc/persona

  Persona: A High-Performance Bioinformatics Framework

  Language:Python4

• spring-guides/tut-spring-boot-kotlin

  Building web applications with Spring Boot and Kotlin :: Learn how to easily build and test web applications with Spring, Kotlin, Junit 5 and JPA

  Language:Kotlin920291

• jenniferlu717/Bracken

  Bracken (Bayesian Reestimation of Abundance with KrakEN) is a highly accurate statistical method that computes the abundance of species in DNA sequences from a metagenomics sample.

  Language:C++29750

• HadrienG/InSilicoSeq

  :rocket: A sequencing simulator

  Language:Python19033

• hyattpd/Prodigal

  Prodigal Gene Prediction Software

  Language:C45185

• YuLab-SMU/treeio

  :seedling: Base Classes and Functions for Phylogenetic Tree Input and Output

  Language:R9926

• rstudio/flexdashboard

  Easy interactive dashboards for R

  Language:JavaScript819300

• rstudio/shiny-server

  Host Shiny applications over the web.

  Language:JavaScript724290

• MGXlab/CAT_pack

  CAT/BAT/RAT: tools for taxonomic classification of contigs and metagenome-assembled genomes (MAGs) and for taxonomic profiling of metagenomes

  Language:Python19831

• SilentGene/Bio-py

  Some useful python scripts for biologists

  Language:Python327

• OSS-Lab/MetQy

  Repository for R package MetQy (read related publication here: https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6247936/)

  Language:R189

• banfieldlab/metabolic-hmms

  HMM databases for microbial metabolic genes of environmental/biogeochemical importance.

  76

• zyxue/ncbitax2lin

  🐞 Convert NCBI taxonomy dump into lineages

  Language:Python14129

• edgraham/BinSanity

  Unsupervised Clustering of Environmental Microbial Assemblies Using Coverage and Affinity Propagation

  Language:Python2914

• bbuchfink/diamond

  Accelerated BLAST compatible local sequence aligner.

  Language:C++1.1k180

• traefik/traefik

  The Cloud Native Application Proxy

  Language:Go52k5.1k

• kevinblighe/PCAtools

  PCAtools: everything Principal Components Analysis

  Language:R33766

• boostorg/boost

  Super-project for modularized Boost

  Language:HTML7.3k1.8k

• jjhelmus/berryconda

  Conda based Python distribution for the Raspberry Pi

  Language:Shell62660

• voutcn/megahit

  Ultra-fast and memory-efficient (meta-)genome assembler

  Language:C++621136

• tseemann/prokka

  :zap: :aquarius: Rapid prokaryotic genome annotation

  Language:Perl855229

• rails/rails

  Ruby on Rails

  Language:Ruby56.3k21.7k

• mikemc/speedyseq

  Speedy versions of phyloseq functions

  Language:R466

• jupyterlab/jupyterlab

  JupyterLab computational environment.

  Language:TypeScript14.3k3.4k

• posquit0/Awesome-CV

  :page_facing_up: Awesome CV is LaTeX template for your outstanding job application

  Language:TeX23.5k4.8k

• biocore/deblur

  Deblur is a greedy deconvolution algorithm based on known read error profiles.

  Language:Python9241

• conda-forge/conda-feedstock

  A conda-smithy repository for conda.

  Language:Batchfile748