Issue while running the NeuroNER on windows system

[Peacelover01]

File "", line 1, in
runfile('D:/PhD/Literature/NeuroNER-master/src/main.py', wdir='D:/PhD/Literature/NeuroNER-master/src')

File "C:\ProgramData\Anaconda3\lib\site-packages\spyder_kernels\customize\spydercustomize.py", line 827, in runfile
execfile(filename, namespace)

File "C:\ProgramData\Anaconda3\lib\site-packages\spyder_kernels\customize\spydercustomize.py", line 110, in execfile
exec(compile(f.read(), filename, 'exec'), namespace)

File "D:/PhD/Literature/NeuroNER-master/src/main.py", line 446, in
main()

File "D:/PhD/Literature/NeuroNER-master/src/main.py", line 395, in main
evaluate.evaluate_model(results, dataset, y_pred, y_true, stats_graph_folder, epoch_number, epoch_start_time, output_filepaths, parameters)

File "D:\PhD\Literature\NeuroNER-master\src\evaluate.py", line 256, in evaluate_model
conll_parsed_output = utils_nlp.get_parsed_conll_output(conll_output_filepath)

File "D:\PhD\Literature\NeuroNER-master\src\utils_nlp.py", line 54, in get_parsed_conll_output
line = conll_output[1].split()

IndexError: list index out of range

[Peacelover01]

Can we use the NeuroNER model for Urdu language, spacy does't support Urdu language. Also can we use other word embedding like Facebook fasttext.

[kaushikacharya]

File "D:\PhD\Literature\NeuroNER-master\src\utils_nlp.py", line 54, in get_parsed_conll_output
line = conll_output[1].split()

IndexError: list index out of range

https://github.com/Franck-Dernoncourt/NeuroNER/blob/master/neuroner/utils_nlp.py#L54

conll_output = [l.rstrip().replace('%','').replace(';','').replace(':', '').strip() for l in codecs.open(conll_output_filepath, 'r', 'utf8')]
parsed_output = {}
line = conll_output[1].split()

It seems conll_output_filepath is an empty file.

Check your calling function:
https://github.com/Franck-Dernoncourt/NeuroNER/blob/master/neuroner/evaluate.py#L262

conll_output_filepath = '{0}_conll_evaluation.txt'.format(output_filepaths[dataset_type])
shell_command = 'perl {0} < {1} > {2}'.format(conll_evaluation_script, output_filepaths[dataset_type], conll_output_filepath) 

Seems perl command doesn't dump anything into conll_output_filepath