FredHutch/easybuild-life-sciences

module nextflow/23.04.0 not working

SarahNadeau opened this issue · 1 comments

I loaded the module using:

module --ignore-cache load "nextflow/23.04.0"

And as I wrote in my comment, it seems the installation of nextflow is somehow broken:

@fizwit I'm sorry if I'm just being thick, but I can't seem to get the new module working. Here's what I tried:

snadeau@gizmoj9:~$ module list

Currently Loaded Modules:
  1) Java/11.0.2     3) ncurses/6.1-GCCcore-8.3.0
  2) GCCcore/8.3.0   4) nextflow/23.04.0

 

snadeau@gizmoj9:~$ nextflow --help
CAPSULE EXCEPTION: java.io.IOException: Cannot run program "$EBROOTJAVA/bin/java": error=2, No such file or directory (for stack trace, run with -Dcapsule.log=verbose)
Unable to initialize nextflow environment

Originally posted by @SarahNadeau in #542 (comment)

fizwit commented

sorry fixed. Please purge and reload the module.

ml nextflow
$ nextflow -v
nextflow version 23.04.0.5858