module nextflow/23.04.0 not working
SarahNadeau opened this issue · 1 comments
SarahNadeau commented
I loaded the module using:
module --ignore-cache load "nextflow/23.04.0"
And as I wrote in my comment, it seems the installation of nextflow is somehow broken:
@fizwit I'm sorry if I'm just being thick, but I can't seem to get the new module working. Here's what I tried:
snadeau@gizmoj9:~$ module list
Currently Loaded Modules:
1) Java/11.0.2 3) ncurses/6.1-GCCcore-8.3.0
2) GCCcore/8.3.0 4) nextflow/23.04.0
snadeau@gizmoj9:~$ nextflow --help
CAPSULE EXCEPTION: java.io.IOException: Cannot run program "$EBROOTJAVA/bin/java": error=2, No such file or directory (for stack trace, run with -Dcapsule.log=verbose)
Unable to initialize nextflow environment
Originally posted by @SarahNadeau in #542 (comment)
fizwit commented
sorry fixed. Please purge and reload the module.
ml nextflow
$ nextflow -v
nextflow version 23.04.0.5858