GenerGener

Pinned Repositories

Candida_auris
Supplemental information on Candida auris current state-of-the-art, reference genome patches, and best-practice recommendations.
10
HIV-ONT-Datasets
Practice set for native RNA sequencing assembly
10
ASAP
Language:R00
Clouseau
A QC suite for large VCF files
Language:Python00
DeNovoSV
A pipeline for calling de novo structural variants from a trio with Nanopore long read data
Language:R00
HIV-1_mRNA_Atlas
00
MASQ
Quality control tool for metagenomic assemblies
Language:Shell00
SCANCNV
Creating an awesome tool to perform CNV QC on WES data independent of callers/platform that focuses on confidence and reportability of CNV calls, particularly in clinical data.
Language:HTML00
super-minityper
Long Read SVs
Language:Dockerfile00
swagg
Language:Shell00

GenerGener's Repositories

GenerGener/Candida_auris
Supplemental information on Candida auris current state-of-the-art, reference genome patches, and best-practice recommendations.
1
GenerGener/HIV-1_mRNA_Atlas
GenerGener/swagg
GenerGener/SCANCNV
Creating an awesome tool to perform CNV QC on WES data independent of callers/platform that focuses on confidence and reportability of CNV calls, particularly in clinical data.
GenerGener/ASAP
GenerGener/MASQ
Quality control tool for metagenomic assemblies
GenerGener/DeNovoSV
A pipeline for calling de novo structural variants from a trio with Nanopore long read data
GenerGener/super-minityper
Long Read SVs
GenerGener/SWIGG
A pipeline for making SWIft Genomes in a Graph (SWIGG) using k-mers
GenerGener/Clouseau
A QC suite for large VCF files
GenerGener/HIV-ONT-Datasets
Practice set for native RNA sequencing assembly
1
GenerGener/VirusGraphs3
Solidifying the VirusGraphs Infrastructure for Deployment
GenerGener/Virus_Graphs
Making Representative Genome Graphs from Eukaryotic Viruses and Phages