GuanLab

By Yuanfang Guan and Lab

Ann Arbor, MI

Pinned Repositories

Anchor
This is the package of Yuanfang's winning algorithm in the ENCODE-DREAM in vivo Transcription Factor Binding Site Prediction Challenge
Language:Perl20 5 05
Awesome-Bioinformatics
2018 Recommended Papers to Read in Bioinformatics as Voted by Bioinformaticians
25 3 04
Brain_Glioma
Documentation for the 2018 BraTS competition
Language:Python15 5 23
DeepSleep
Language:Python40 5 416
FastClone_GuanLab
Language:Python15 5 135
GuanRank-R
The Best-performing Survival Model in many competitions
Language:R6 3 11
Leopard
Language:Python16 5 125
proteome_prediction
This is the package of GuanLab's winning algorithm in the NCI-CPTAC DREAM Proteogenomics Challenge
Language:R64
timesias
Predict outcomes from time-series data
Language:HTML6 4 01
Traditional-Machine-learning-self-study-syllabus
7 4 01

GuanLab's Repositories

GuanLab/DeepSleep
Language:Python40 5 416
GuanLab/Leopard
Language:Python16 5 125
GuanLab/FastClone_GuanLab
Language:Python15 5 135
GuanLab/DrugComb-cross-study-prediction
machine learning models for cross-study combination response prediction
Language:Jupyter Notebook6 3 10
GuanLab/timesias
Predict outcomes from time-series data
Language:HTML6 4 01
GuanLab/sepsis
Top-performing algorithm for DII National Data Science Challenge
Language:HTML5 4 01
GuanLab/GuanRank_All
Application examples of GuanRank in deep learning (images), lightGBM and recurrent neural networks (time-series)
Language:Roff4 5 02
GuanLab/Microarray
Language:Python41
GuanLab/Ocelot
Language:Python4 3 01
GuanLab/Sleep-Stage-Auto-annotation
Language:Python4 4 02
GuanLab/TAIJI
TAIJI: Approaching Experimental Replicates-Level Accuracy for Drug Synergy Prediction --Yuanfang's DREAM Drug Synergy Winning Algorithm
Language:Perl3 4 01
GuanLab/Sequence_Analysis_for_TF-co-binding
Language:Perl2 3 01
GuanLab/BEAT-PD
BEAT-PD winning algorithm
Language:Python1 4 0
GuanLab/CausalBench2023_Challenge
The winning solution of the CausalBench 2023 Challenge
Language:Python1 2 0
GuanLab/ENCODE_imputation
Language:Python1 4 01
GuanLab/Image_based_doublet_detection
Language:Python1 1 0
GuanLab/PDTap
Language:Python1 4 01
GuanLab/Cell-Linage-Reconstruction
2019 DREAM Lineage Reconstruction Challenge
Language:Python0 3 01
GuanLab/ciclops
Pipeline for building clinical outcome prediction models on training dataset and transfer learning on validation datasets.
Language:Python0 2 00
GuanLab/DDR-drug-synergy-prediction-ShinyApp
Shiny app for DDR drug synergy prediction based on molecular context
Language:HTML0 5 00
GuanLab/CODA_TB_DREAM_Challenge
Code to CODA TB DREAM Challenge
Language:Python2 0
GuanLab/COVID-19
Language:Python
GuanLab/DDR_combination_analysis
Statistical analysis of DDR combination response
Language:Jupyter Notebook2 0
GuanLab/For_new_lab_members
Startup settings for new lab members
4 0
GuanLab/ImageDoubler
Language:Jupyter Notebook
GuanLab/Mandora
Language:Python2 0
GuanLab/Predict-Malaria-ART-Resistance
Winning algorithm in 2019 Malaria DREAM Challenge Subchallenge 2
Language:Python4 0
GuanLab/PSGRN
Language:Python
GuanLab/Sensorium2022_Challenge
The winning solution for the SENSORIUM 2022 Challenge
Language:Jupyter Notebook
GuanLab/single_cell_imputation
Language:Python4 0