I have a question on the type of the database.
chunfengshiliburuni opened this issue · 3 comments
I have a question on the database. I want to know how to make the lmdb type of dataset. I mean how to use float singal label to make lmdb format (such as the format: [ftw437.jpg 2.883333] [mty1384.jpg 2.466667])
Thanks in advance.
If you are using caffe, you can add the file into /caffe/tools/
// This program converts a set of images to a lmdb/leveldb by storing them
// as Datum proto buffers.
// Usage:
// convert_imageset [FLAGS] ROOTFOLDER/ LISTFILE DB_NAME
//
// where ROOTFOLDER is the root folder that holds all the images, and LISTFILE
// should be a list of files as well as their labels, in the format as
// subfolder1/file1.JPEG 7
// ....
#include <algorithm>
#include <fstream> // NOLINT(readability/streams)
#include <string>
#include <utility>
#include <vector>
#include "boost/scoped_ptr.hpp"
#include "gflags/gflags.h"
#include "glog/logging.h"
#include "caffe/proto/caffe.pb.h"
#include "caffe/util/db.hpp"
#include "caffe/util/format.hpp"
#include "caffe/util/io.hpp"
#include "caffe/util/rng.hpp"
using namespace caffe; // NOLINT(build/namespaces)
using std::pair;
using boost::scoped_ptr;
DEFINE_bool(gray, false,
"When this option is on, treat images as grayscale ones");
DEFINE_bool(shuffle, false,
"Randomly shuffle the order of images and their labels");
DEFINE_string(backend, "leveldb",
"The backend {lmdb, leveldb} for storing the result");
DEFINE_int32(resize_width, 0, "Width images are resized to");
DEFINE_int32(resize_height, 0, "Height images are resized to");
DEFINE_bool(check_size, false,
"When this option is on, check that all the datum have the same size");
DEFINE_bool(encoded, false,
"When this option is on, the encoded image will be save in datum");
DEFINE_string(encode_type, "",
"Optional: What type should we encode the image as ('png','jpg',...).");
int main(int argc, char** argv) {
#ifdef USE_OPENCV
::google::InitGoogleLogging(argv[0]);
// Print output to stderr (while still logging)
FLAGS_alsologtostderr = 1;
#ifndef GFLAGS_GFLAGS_H_
namespace gflags = google;
#endif
gflags::SetUsageMessage("Convert a set of images to the leveldb/lmdb\n"
"format used as input for Caffe.\n"
"Usage:\n"
" convert_imageset [FLAGS] ROOTFOLDER/ LISTFILE DB_NAME\n");
gflags::ParseCommandLineFlags(&argc, &argv, true);
if (argc < 4) {
gflags::ShowUsageWithFlagsRestrict(argv[0], "tools/convert_imageset");
return 1;
}
const bool is_color = !FLAGS_gray;
const bool check_size = FLAGS_check_size;
const bool encoded = FLAGS_encoded;
const string encode_type = FLAGS_encode_type;
std::ifstream infile(argv[2]);
std::vector<std::pair<std::string, float> > lines;
std::string filename;
float label;
while (infile >> filename >> label) {
lines.push_back(std::make_pair(filename, label));
}
if (FLAGS_shuffle) {
// randomly shuffle data
LOG(INFO) << "Shuffling data";
shuffle(lines.begin(), lines.end());
}
LOG(INFO) << "A total of " << lines.size() << " images.";
if (encode_type.size() && !encoded)
LOG(INFO) << "encode_type specified, assuming encoded=true.";
int resize_height = std::max<int>(0, FLAGS_resize_height);
int resize_width = std::max<int>(0, FLAGS_resize_width);
// Create new DB
scoped_ptr<db::DB> db(db::GetDB(FLAGS_backend));
db->Open(argv[3], db::NEW);
scoped_ptr<db::Transaction> txn(db->NewTransaction());
// Storing to db
std::string root_folder(argv[1]);
Datum datum;
int count = 0;
int data_size = 0;
bool data_size_initialized = false;
for (int line_id = 0; line_id < lines.size(); ++line_id) {
bool status;
std::string enc = encode_type;
if (encoded && !enc.size()) {
// Guess the encoding type from the file name
string fn = lines[line_id].first;
size_t p = fn.rfind('.');
if ( p == fn.npos )
LOG(WARNING) << "Failed to guess the encoding of '" << fn << "'";
enc = fn.substr(p);
std::transform(enc.begin(), enc.end(), enc.begin(), ::tolower);
}
status = ReadImageToDatum(root_folder + lines[line_id].first,
lines[line_id].second, resize_height, resize_width, is_color,
enc, &datum);
if (status == false) continue;
if (check_size) {
if (!data_size_initialized) {
data_size = datum.channels() * datum.height() * datum.width();
data_size_initialized = true;
} else {
const std::string& data = datum.data();
CHECK_EQ(data.size(), data_size) << "Incorrect data field size "
<< data.size();
}
}
// sequential
string key_str = caffe::format_int(line_id, 8) + "_" + lines[line_id].first;
// Put in db
string out;
CHECK(datum.SerializeToString(&out));
txn->Put(key_str, out);
if (++count % 1000 == 0) {
// Commit db
txn->Commit();
txn.reset(db->NewTransaction());
LOG(INFO) << "Processed " << count << " files.";
}
}
// write the last batch
if (count % 1000 != 0) {
txn->Commit();
LOG(INFO) << "Processed " << count << " files.";
}
#else
LOG(FATAL) << "This tool requires OpenCV; compile with USE_OPENCV.";
#endif // USE_OPENCV
return 0;
}
Anyway, I suggest to read image directly rather than using lmdb...
I am so sorry to bother you.I run the create_imagenet.sh after I added that file(renamed convert_imageset) into caffe/tools/. There were some errors. Actually, I don't understand fully what you mean. In other words, how should I use the file to make lmdb. One more thing, the dataset--train.txt (e.g ***.jpg, 2.735), if I read images directly,there may be some errors, beacuse of the the data type of label (float).Thanks in advance.