The reference atom for periodic boundary conditions will not be considered
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BerndDoser commented
The MDP-options ramd-group<n>-receptor-pbcatom and ramd-group<n>-ligand-pbcatom will not be considered.
BerndDoser commented
It was revealed that the function used to compare the MDP strings ignores dashes. Therefore, despite their differences in appearance, 'pbc-atom' and 'pbcatom' were considered equal. To avoid confusion, the dash will be removed.