New terms for CMI-PB
Closed this issue · 2 comments
jamesaoverton commented
I need the following terms for the CMI-PB project. I'd like to reserve these IDs and use them right away:
| ID | Label | Parent |
|---|---|---|
| ONTIE:0003550 | Pertussis toxin complex | GO protein complex |
| ONTIE:0003551 | Pertussis toxin complex, inactivated by PFA | Pertussis toxin complex |
| ONTIE:0003552 | Pertussis toxin complex, inactivated mutant | Pertussis toxin complex |
| ONTIE:0003553 | mixture of Fim2 and Fim3 | ChEBI mixture? |
It's worthwhile creating a protein-complex template to handle the first three. I guess it makes sense for the fourth to also go on that sheet, even though it's a mixture and not actually a complex.
We have a list of parts for 'Pertussis toxin complex' and 'mixture of Fim2 and Fim3' but they're UniProt IDs. Please check if they're in PR.
| Uniprot | Label | Synonym |
|---|---|---|
| P04977 | Pertussis toxin subunit 1 | |
| P04978 | Pertussis toxin subunit 2 | |
| P04979 | Pertussis toxin subunit 3 | |
| P0A3R5 | Pertussis toxin subunit 4 | |
| P04981 | Pertussis toxin subunit 5 | |
| Q5I8X0 | Fimbrial protein | Fim2 |
| A0A171JW18 | Fimbrial protein Fim3 | Fim3 |
beckyjackson commented
If those are in PR, should I import them?
jamesaoverton commented
Yes please. If any of them are not in PR, please just include the Uniprot IDs as an rdfs:comment for now.