pip install is version 1.1.23?

Question

pip install is version 1.1.23?

dmcmanam opened this issue a year ago · 8 comments

I would like to install the latest version to read NovaSeqX files but pip install only has up to version 1.1.23? Can you update the build from source instructions to include directions for making the current python bindings?

Answer 1 · 2023-10-31T14:36:28.000Z

I see it up there.
https://pypi.org/project/interop/#files

What version of python and OS are you looking for?

Answer 2 · 2023-10-31T15:02:41.000Z

I'm looking for Linux CentOS 7, any version of python 3.

Answer 3 · 2023-10-31T15:07:30.000Z

Do you have 1.1.23 already installed?

Answer 4 · 2023-10-31T15:08:58.000Z

Yes,

pip show interop
Name: interop
Version: 1.1.23

Answer 5 · 2023-10-31T15:13:23.000Z

When you want to update a python package with pip you have to add -U

For example pip install -U interop. This is likely why it is not updating

Answer 6 · 2023-10-31T16:22:40.000Z

So far I still haven't installed the current version. For example: pip install interop==1.2.4 ERROR: Could not find a version that satisfies the requirement interop==1.2.4 (from versions: 1.1.18, 1.1.19, 1.1.21, 1.1.22, 1.1.23) ERROR: No matching distribution found for interop==1.2.4

…

On Tue, Oct 31, 2023 at 11:13 AM Robert Langlois ***@***.***> wrote: When you want to update a python package with pip you have to add -U For example pip install -U interop. This is likely why it is not updating — Reply to this email directly, view it on GitHub <#328 (comment)>, or unsubscribe <https://github.com/notifications/unsubscribe-auth/ADH6XLCWGDATKW5B4HHFW6DYCEIR5AVCNFSM6AAAAAA6V5CDHSVHI2DSMVQWIX3LMV43OSLTON2WKQ3PNVWWK3TUHMYTOOBXGQZDEOBYGY> . You are receiving this because you authored the thread.Message ID: ***@***.***>

Answer 7 · 2023-10-31T16:55:30.000Z

The reasons pip could fail are:

pip not configured properly
You are running an ARM chip
You have an unsupported version of python3

I did a test with the latest CentOS 7 docker image (after installing python3 from yum).

[root@566f65e778dd tmp]# pip3 install interop
WARNING: Running pip install with root privileges is generally not a good idea. Try `pip3 install --user` instead.
Collecting interop
  Downloading https://files.pythonhosted.org/packages/06/f2/060f837f66d6c4acaf8f9153ac63c05446b76913f10ecd7336533cde1211/interop-1.2.4-cp36-cp36m-manylinux1_x86_64.whl (4.2MB)
    100% |################################| 4.2MB 345kB/s 
Collecting numpy>=1.16.6; python_version >= "3.5" (from interop)
  Downloading https://files.pythonhosted.org/packages/45/b2/6c7545bb7a38754d63048c7696804a0d947328125d81bf12beaa692c3ae3/numpy-1.19.5-cp36-cp36m-manylinux1_x86_64.whl (13.4MB)
    100% |################################| 13.4MB 101kB/s 
Installing collected packages: numpy, interop
Successfully installed interop-1.2.4 numpy-1.19.5

We don't support python 3.11 yet, otherwise maybe you can find the wheel here: https://pypi.org/project/interop/#files

Answer 8 · 2023-11-02T12:30:16.000Z

Thank you, I upgraded to python 3.10 and now everything is working fine.