Pinned Repositories
Benchmark-Models-PEtab
A collection of mathematical models with experimental data in the PEtab format as benchmark problems in order to evaluate new and existing methodologies for data-based modelling
d2d
a modeling environment tailored to parameter estimation in dynamical systems
GenSSI
GenSSI 2.0 - Generating Series for testing Structural Identifiability
PESTO
PESTO: Parameter EStimation TOolbox, Bioinformatics, btx676, 2017.
d2d
a modeling environment tailored to parameter estimation in dynamical systems
integrative-pathway-models
integrative-pathway-models
MEMO
MEMO - A Matlab Toolbox for Multi-Experiment mixture MOdel analysis of censored data
SBtab
SBtab - Table format for Systems Biology:
ShAPE-DALSP
Simulation Algorithm and Parameter Estimation method (ShAPE) for Division-, Age- and Label-Structured Population (DALSP) models
PEtab
PEtab - an SBML and TSV based data format for parameter estimation problems in systems biology
JanHasenauer's Repositories
JanHasenauer/integrative-pathway-models
integrative-pathway-models
JanHasenauer/d2d
a modeling environment tailored to parameter estimation in dynamical systems
JanHasenauer/ShAPE-DALSP
Simulation Algorithm and Parameter Estimation method (ShAPE) for Division-, Age- and Label-Structured Population (DALSP) models
JanHasenauer/MEMO
MEMO - A Matlab Toolbox for Multi-Experiment mixture MOdel analysis of censored data
JanHasenauer/SBtab
SBtab - Table format for Systems Biology: