Pinned Repositories
AllenBrainConnectivityNetworkAnalysis
Network analysis on connectivity matrix provided by Allen brain institute nature paper published on April 2014.
cilds
Dimensionality reduction of calcium-imaged neuronal population activity
delayed-neural-field
Neural field with finite transmission speed
MAIN_2022_calRSA
Notebook demonstration of basic RSA approaches to explore representational structure in 1p calcium imaging data
MIN1PIPE
A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
PatchWarp
Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
single-cell-calcium-imaging-toolkit
A collection of the scripts suitable for anlyzing single-cell calicum imaging data
zig
Zero-Inflated Gamma probabilistic model
Javad-Karimi's Repositories
Javad-Karimi/AllenBrainConnectivityNetworkAnalysis
Network analysis on connectivity matrix provided by Allen brain institute nature paper published on April 2014.
Javad-Karimi/delayed-neural-field
Neural field with finite transmission speed
Javad-Karimi/cilds
Dimensionality reduction of calcium-imaged neuronal population activity
Javad-Karimi/MAIN_2022_calRSA
Notebook demonstration of basic RSA approaches to explore representational structure in 1p calcium imaging data
Javad-Karimi/MIN1PIPE
A MINiscope 1-photon-based Calcium Imaging Signal Extraction PIPEline.
Javad-Karimi/PatchWarp
Image processing pipeline to correct motion artifacts and complex image distortions in neuronal calcium imaging data.
Javad-Karimi/single-cell-calcium-imaging-toolkit
A collection of the scripts suitable for anlyzing single-cell calicum imaging data
Javad-Karimi/zig
Zero-Inflated Gamma probabilistic model