Jerkwin/gmxtools

Awk error: division by zero attempted

pallavsen007 opened this issue · 1 comments

Frame 1/13: _pid~25nsawk: cmd. line:205: (FILENAME=_pid.pdb FNR=122499) fatal: division by zero attempted
I have been encountering this with a new system. I have post processed the trajectory properly by -pbc whole and then used -pbc mol, and while running I'm encountering this error. Is this the problem with the system or that of my trajectory post processing?

I could get some idea of the problem as the charge of one of my co-factor is zero. This could be the reason behind this phenomenon. Moreover when I went back and had a close look at my files, what I saw was that I had not prepared the co-factor's files properly.