KrishnaswamyLab/graphtools

Issues

• Please depend on `igraph` instead of `python-igraph`

  #68 opened a year ago by szhorvat
  0

• Support for unweighted kNN graphs

  #67 opened 2 years ago by stanleyjs
  0

• Install issue, probably sklearn -> scikit-learn versions

  #64 opened 2 years ago by bbimber
  1

• Using MNN corrected values in PHATE and other dimensionality reduction techniques.

  #63 opened 2 years ago by jluthy
  0

• `test_exact.test_shortest_path_affinity` fails

  #61 opened 3 years ago by stanleyjs
  0

• Landmark graph size does not match n_landmark

  #60 opened 3 years ago by stanleyjs
  0

• Inaccuracy in randomized SVD at moderate ranks

  #58 opened 3 years ago by stanleyjs
  7

• MNNGraph parameters

  #56 opened 4 years ago by dburkhardt
  0

• `graphtools.data`

  #51 opened 5 years ago by scottgigante
  0

• Change default decay to match PHATE

  #40 opened 5 years ago by dburkhardt
  0

• Change MNN API to match common diction

  #41 opened 5 years ago by dburkhardt
  0

• k should scale with dataset size

  #42 opened 5 years ago by dburkhardt
  1

• Add batch neighbor counting helper

  #38 opened 6 years ago by dburkhardt
  0

• PyGSP

  #37 opened 6 years ago by mdeff
  1

• Import error if scikit-learn version >20.x

  #34 opened 6 years ago by alexblaessle
  3

• Refactor kernel tools

  #33 opened 6 years ago by stanleyjs
  0

• MNN initialization with large number of batches fails

  #12 opened 6 years ago by stanleyjs
  7

• MNN Graph tests fail randomly

  #11 opened 6 years ago by scottgigante
  1

• spectral clustering using SVD on P is wrong

  #6 opened 6 years ago by stanleyjs
  2

• mnn_kernel fails when sample_idx is not python indexed

  #9 opened 6 years ago by stanleyjs
  0

• pygsp g.U is overriden by SVD-based graphs

  #7 opened 6 years ago by stanleyjs
  1

• Warning when instantiating MNN graph

  #2 opened 6 years ago by dburkhardt
  3