LieberInstitute/HumanPilot

Looking for "Ground Truth"

edgarfelizmenio opened this issue · 1 comments

Hello, I am currently exploring the dataset for a project that I am doing but I can't seem to find a comprehensive documentation on the available data. I am specifically looking for the ground truth but I am not quite sure if I can use layer_guess.

Any help would be appreciated.

Thanks!

Hi @edgarfelizmenio,

The manual annotations are in the spe$spatialLIBD as well as layer_guess (and a few other related names). As for documentation, it's available at http://spatial.libd.org/spatialLIBD/ as well as
https://github.com/LieberInstitute/spatialLIBD/blob/devel/inst/app/www/documentation_spe.md#common-options.

Screenshot 2024-07-23 at 3 30 04 PM Screenshot 2024-07-23 at 3 30 10 PM

Best,
Leonardo