Intratumoral CD8+ T cells with a tissue-resident phenotype mediate local immunity and immune checkpoint responses in breast cancer
This repository is for the publication: "Intratumoral CD8+ T cells with a tissue-resident phenotype mediate local immunity and immune checkpoint responses in breast cancer".
The single cell analysis code is in the file "single_cell_analysis.R".
Data:
Raw and processed single cell data: https://zenodo.org/record/7325111
Raw and processed rna-seq data: https://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE218161