Fixed Matrix version incompatible with SeuratObject
lardenoije opened this issue · 1 comments
lardenoije commented
There was probably a good reason to fix the Matrix package version to 1.6-1.1, however this version appears to be incompatible with the SeuratObject package (version 5.0.1), which requires it to be >= 1.6.3. If I install SPOTlight without that commit (https://github.com/MarcElosua/SPOTlight/tree/0c8a2879fbe1422a1ef5973c20939249ce8f54ca) it appears to work with SeuratObjects without issues.
MarcElosua commented
hi @lardenoije Thank you for the heads up!
I was trying to figure out how to fix the discrepancy between Seurat and the Matrix package! Everything should be solved in the devel
branch and pushed to Bioconductor.
This should work now:
install_github("https://github.com/MarcElosua/SPOTlight@devel")