Does the new version of SPOTlight no longer support data from Seurat?
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Lukadon77 commented
It is found that the new version of SPOTlight analyze data from singlecellexperiment format, can SPOTlight still support data from seurat?
MarcElosua commented
Hi @Lukadon77,
Yes, the bioconductor version of SPOTlight can take in SinglecellExperiment & Seurat objects as well as sparse/dense matrices.