Maxim-Karpov

PhD student in Ecotoxicogenomics at King's College London.

Pinned Repositories

P_RNA_scaffolder
use paired-end transcriptome reads to scaffold genomes
Language:Perl10 0 63
SQANTI3
Tool for the Quality Control of Long-Read Defined Transcriptomes
Language:HTML199 10 28749
AnnoPRO
Feature map and function annotation of Proteins
Language:Python30 0 117
UPIMAPI
UniProt Id Mapping through API
Language:Python31 2 104
matplotlib-cpp
Extremely simple yet powerful header-only C++ plotting library built on the popular matplotlib
Language:C++4.4k 113 2321.1k
BLAST-smart
Multi-threaded, memory-aware, BLAST toolkit for searching large biological sequence databases on personal systems.
Language:Shell00
PhD_thesis
Language:Jupyter Notebook00
project_showcase
Language:Jupyter Notebook00
Finder
A fully automated gene annotator from RNA-Seq expression data
Language:Python57 5 7614
goatools
Python library to handle Gene Ontology (GO) terms
Language:Python782 23 214210

Maxim-Karpov's Repositories

Maxim-Karpov/BLAST-smart
Multi-threaded, memory-aware, BLAST toolkit for searching large biological sequence databases on personal systems.
Language:Shell00
Maxim-Karpov/PhD_thesis
Language:Jupyter Notebook00
Maxim-Karpov/project_showcase
Language:Jupyter Notebook00