Pinned Repositories
4C-Workflow
Generalized Snakemake workflow for R.4Cker
a_little_book_of_python_for_multivariate_analysis
A Little Book of Python for Multivariate Analysis
ACGT_Pipelines
Pipelines for ACGT Bioinformatics Analysis
APL
APOL1_scRNAseq_Paper
This folder contains the markdown file used to perform the analysis displayed in the paper.
awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
biotools
A list of useful bioinformatics resources
lcdb_website
MediciPrime.github.io
tdd
MediciPrime's Repositories
MediciPrime/4C-Workflow
Generalized Snakemake workflow for R.4Cker
MediciPrime/lcdb_website
MediciPrime/MediciPrime.github.io
MediciPrime/tdd
MediciPrime/ACGT_Pipelines
Pipelines for ACGT Bioinformatics Analysis
MediciPrime/APL
MediciPrime/APOL1_scRNAseq_Paper
This folder contains the markdown file used to perform the analysis displayed in the paper.
MediciPrime/awesome-single-cell
List of software packages for single-cell data analysis, including RNA-seq, ATAC-seq, etc.
MediciPrime/biotools
A list of useful bioinformatics resources
MediciPrime/lcdb-wf
streamlined version of lcdb-workflows
MediciPrime/Repository-Images
Images for README.md are located here
MediciPrime/coding-interview-university
A complete computer science study plan to become a software engineer.
MediciPrime/CRISPRd_Tiling_Assay
Tiling Assay used to delete all lncRNA sites without flanking any protein coding genes.
MediciPrime/data-science-in-tidyverse
Data Science in the tidyverse, a two-day workshop @ rstudio:conf(2018)
MediciPrime/developer-roadmap
Roadmap to becoming a web developer in 2018
MediciPrime/emacs24-starter-kit
A cleaner version of the literate starter kit based on Emacs24
MediciPrime/flaskr-tdd
Flaskr: Intro to Flask, Test Driven Development (TDD), and jQuery
MediciPrime/Guardant_Health
GATK_Pipeline
MediciPrime/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations
MediciPrime/mit-deep-learning-book-pdf
MIT Deep Learning Book in PDF format (complete and parts) by Ian Goodfellow, Yoshua Bengio and Aaron Courville
MediciPrime/pgRNADesign
MediciPrime/pindel
Pindel can detect breakpoints of large deletions, medium sized insertions, inversions, tandem duplications and other structural variants at single-based resolution from next-gen sequence data. It uses a pattern growth approach to identify the breakpoints of these variants from paired-end short reads.
MediciPrime/PIVOT
Platform for Interactive analysis and Visualization Of Transcriptomics data
MediciPrime/rush
A cross-platform command-line tool for executing jobs in parallel
MediciPrime/single-cell-rna-seq
A single cell RNA-seq workflow following http://dx.doi.org/10.12688/f1000research.9501.2
MediciPrime/ssRNA-seq
Pipelines for single cell RNA-seq
MediciPrime/STATS506
All assignments and projects regarding the STATS 507 course.
MediciPrime/tcga_pipeline
The Cancer Genome Atlas Pipeline
MediciPrime/Tempus_Challenge
MediciPrime/trezor-core
:lock: Don't use this repo, use the new monorepo instead: