Nealelab/picopili

Issues

• pca_rel.py cannot open libgsl.so.0 shared object

  #65 opened 5 years ago by a-marin
  0

• Include sex in PCA results

  #28 opened 8 years ago by rkwalters
  2

• Create separate config file for picopili

  #35 opened 8 years ago by rkwalters
  3

• Allow disabling email

  #53 opened 8 years ago by rkwalters
  1

• numpy version requirements for admix_rel.py

  #40 opened 8 years ago by rkwalters
  1

• Incorporate updates to reference matching from ricopili

  #52 opened 8 years ago by rkwalters
  0

• Default values in ped filter

  #39 opened 9 years ago by rkwalters
  0

• Missing GWAS output crashes aggregation? (rare)

  #37 opened 9 years ago by rkwalters
  3

• Add more lenient "bgn"-style imputation output

  #32 opened 9 years ago by rkwalters
  0

• pca_rel.py incompatible with ricopili-style fid tags

  #25 opened 9 years ago by rkwalters
  0

• chunk_snps.py works for autosomes only

  #26 opened 9 years ago by rkwalters
  0

• HWE filter fails if NA p-values present

  #27 opened 9 years ago by rkwalters
  1

• ID renaming for imputation

  #20 opened 9 years ago by rkwalters
  1