[FragPipe]_the protein FDR filter didn't reach the desired threshold, try a higher threshold using the --prot parameter

[Luc2702]

log_2024-05-14_11-54-23.txt

Hello,

I am trying to perform label-free quantification with LFQ-MBR on mzML converted files. I am getting an error regarding FDR threshold.
Would you have any idea how to fix this issue ? I have attached the log report.

Thanks for your help!

[fcyu]

Same as Nesvilab/philosopher#493.