Pinned Repositories
bam-readcount
count DNA sequence reads in BAM files
cromwell
Workflow Execution Engine using WDL
deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
genome
Core modules used by the GMS
GKL
Accelerated kernel library for genomics
hadoop
Mirror of Apache Hadoop
Hello-World
Just another repository
HelloGitHub
:octocat: 分享 GitHub 上有趣、入门级的开源项目
java-belief-propagation
JointSNVMix
Automatically exported from code.google.com/p/joint-snv-mix
OlivasLee's Repositories
OlivasLee/GKL
Accelerated kernel library for genomics
OlivasLee/bam-readcount
count DNA sequence reads in BAM files
OlivasLee/cromwell
Workflow Execution Engine using WDL
OlivasLee/deepvariant
DeepVariant is an analysis pipeline that uses a deep neural network to call genetic variants from next-generation DNA sequencing data.
OlivasLee/genome
Core modules used by the GMS
OlivasLee/hadoop
Mirror of Apache Hadoop
OlivasLee/Hello-World
Just another repository
OlivasLee/HelloGitHub
:octocat: 分享 GitHub 上有趣、入门级的开源项目
OlivasLee/java-belief-propagation
OlivasLee/JointSNVMix
Automatically exported from code.google.com/p/joint-snv-mix
OlivasLee/joinx
a tool for processing .bed and .vcf files
OlivasLee/LaTeXTools
LaTeX plugin for Sublime Text 2 and 3
OlivasLee/learngit
This is a exercising project for having a good knowledge of git and github.
OlivasLee/mlpack
mlpack: a scalable C++ machine learning library
OlivasLee/msisensor
microsatellite instability detection using paired tumor-normal
OlivasLee/MuSE
Somatic point mutation caller
OlivasLee/mutationseq
Software for somatic SNV detection using next generation sequencing (NGS) data.
OlivasLee/OlivasLee.github.io
Record all my mind. Keep doing it
OlivasLee/Pokemon-Go-Controller
play pokemon go safely or at unavailable area
OlivasLee/PowerGraph
PowerGraph: A framework for large-scale machine learning and graph computation.
OlivasLee/pybam
Very simple, pure python, BAM file reader
OlivasLee/pydata-book
Materials and IPython notebooks for "Python for Data Analysis" by Wes McKinney, published by O'Reilly Media
OlivasLee/samtools
Tools (written in C using htslib) for manipulating next-generation sequencing data
OlivasLee/Shark
The Shark Machine Leaning Library. See more:
OlivasLee/UCASthesis
a LaTeX template for UCAS (Currently support ICT and IIE, please find IIE version in branches.)
OlivasLee/variationanalysis
This repository holds the companion project to Goby3, used to train and evaluate deep learning models to call variations. This repository contains the Matcha framework to help train and evaluate deep learning models trained with semi-simulation. See docs below for details.
OlivasLee/zhihu-spider
A web spider for zhihu.com