Validation of BEL 2.0 expression (fusion) fails
Closed this issue · 2 comments
maestroe commented
Examples taken from BEL 2.0 specification
Valid term
r(fus(HGNC:TMPRSS2, r.1_79, HGNC:ERG, r.312_5034))
delivers following validation object:
{
"validation": {
"expression": "r(fus(HGNC:TMPRSS2, r.1_79, HGNC:ERG, r.312_5034))",
"message": "Invalid syntax.",
"term_signatures": [
],
"valid_semantics": false,
"valid_syntax": false,
"warnings": [
]
}
}
Tested with BEL 2.0 endpoint and API method "/api/expressions/{term}/validation".
wshayes commented
Fixed this in the documentation when I fixed the variant BEL2 documentation.
This validates: r(fus(HGNC:TMPRSS2, "r.1_79", HGNC:ERG, "r.312_5034"))
maestroe commented
I can confirm that this validates!