Using the bootstrapping option (--iters) adds an extra line to the output abundances file
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tmaklin commented
If mSWEEP is run with the --iters
option enabled, the output *_abundances.txt
file will have an extra empty line at the end when compared to the *_abundances.txt
file that would be produced without the --iters
option. This extra line confuses some postprocessing tools like mGEMS, and the file format should be fixed so that there is no extra line at the end of the *_abundances.txt
file.
I will add a fix as soon as possible.