Mask not loading properly with MONAILabelReviewer slicer plugin
bkonkva opened this issue · 0 comments
I've installed the MONAILabelReview plugin for slicer in linux. I'm using a recent monai version (0.8.1) w/ the slicer 5.7.0 nightly build (i tried w/ 5.6.1 stable as well).
I have the monailabel server running. I can hit the http://0.0.0.0:8080 server from slicer via the reviewer plugin and the first image loads. However the corresponding mask does not load. I can see the folder w/ the labels under "Version of labels" in Slicer - which I believe means that it is able to recognize that the correct mask exists. I'm also able to load that mask manually and have it appear correctly.
image data is in: data/images/####_0000.nii.gz
labels in: data/images/labels/original/####_0000.nii.gz
server started w/:
monailabel start_server --port 8080 --app /apps/radiology --studies /data/images --conf models segmentation
Could use some suggestions for troubleshooting.