Protocol name patterns should be passed space-separated to the CLI rather than comma-separated
astewartau opened this issue · 1 comments
astewartau commented
For example, 1_dicomConvert.py is run with:
INFO: Command: /home/ashley/neurodesktop-storage/repos/qsmxt/run_1_dicomConvert.py /home/ashley/.qsmxt/dicoms /home/ashley/.qsmxt/bids --auto_yes --t2starw_protocol_patterns *t2starw*,*qsm*,*stronger* --t1w_protocol_patterns *t1w*This causes QSMxT to error since the three protocols are interpreted as one.
astewartau commented
Fixed in 699a80f