Software package associated with the paper:
MutComFocal: an integrative approach to identifying recurrent and focal genomic alterations in tumor samples.
Trifonov V, Pasqualucci L, Dalla Favera R, Rabadan R.
BMC Systems Biology 2013 Mar 25;7:25. doi: 10.1186/1752-0509-7-25.
See how_to_use_mutcomfocal.pdf for instructions.