Genome annotation with Infernal
Closed this issue · 9 comments
Hi Eric!
This repo is the new Rfam documentation that I mentioned earlier. The docs are automatically deployed at http://rfam.readthedocs.io from the master branch, so Rfam team members can edit the text online using GitHub without having to access EBI servers.
I thought a page like this could be used to provide some examples of running Infernal locally:
http://rfam.readthedocs.io/en/latest/genome-annotation.html
Then we can point users to these examples when answering to RT tickets.
Would you be able to write a section (or a new page) about running Infernal and send a pull request please? Any feedback is of course very welcome too.
Sure, Anton. Great idea. I am happy to write a page about Infernal with some examples, but I'm busy this week. I should be able to get at least started on this next week.
Sounds good, thank you very much Eric!
Just an update -- I didn't have time this week (tomorrow is a holiday here) but have time set aside to start on this next week.
Thanks for the update! Enjoy your long weekend.
Anton, do you mind if I push my local branch to master as I'm making my edits, for backup reasons, and so I can potentially work on it from different computers?
Sure thing, Eric! You could also have your commits on a feature branch and
push it to GitHub and sync that way but if you prefer to push to master
it's fine too.
On Wed, 16 Nov 2016 at 19:28, Eric Nawrocki notifications@github.com
wrote:
Anton, do you mind if I push my local branch to master as I'm making my
edits, for backup reasons, and so I can potentially work on it from
different computers?—
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Push feature branch to master and make commits on the feature branch (and also push those commits to master) is what I meant. I won't commit directly to master until you've looked at it and approved.
Sounds great, thank you Eric! You meant master repo, not branch, I got it
now. Feel free to create as many feature branches as you need. Look forward
to merging your changes!
On Wed, 16 Nov 2016 at 20:01, Eric Nawrocki notifications@github.com
wrote:
Push feature branch to master and make commits on the feature branch (and
also push those commits to master) is what I meant. I won't commit directly
to master until you've looked at it and approved.—
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#3 (comment), or mute
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Closed with #16.