Make validation of SEQ_ASSAY_IDs case-insensitive
hhunterzinck opened this issue · 1 comments
hhunterzinck commented
The SEQ_ASSAY_IDs in the assay_information.yaml are being compared to the 'Sample Clinical Database' table (syn7517674), which converts the SEQ_ASSAY_IDs to all uppercase. If the SEQ_ASSAY_IDs assay_information.yaml contain lowercase characters, they will be erroneously flagged.
hhunterzinck commented
the 'Sample Clinical Database' table (syn7517674) also converts '_' to '-' so this needs to be addressed as well