Pinned Repositories
hts-nim
nim wrapper for htslib for parsing genomics data files
bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
data-science-ipython-notebooks
Continually updated data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.
hts-nim
nim wrapper for htslib for parsing genomics data files
intervaltree
A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.
kann
A lightweight C library for artificial neural networks
knitr
A general-purpose tool for dynamic report generation in R
Platypus
Platypus Variant Caller
PyVCF
A Variant Call Format reader for Python.
Sbeaum's Repositories
Sbeaum/bcbio-nextgen
Validated, scalable, community developed variant calling, RNA-seq and small RNA analysis
Sbeaum/data-science-ipython-notebooks
Continually updated data science Python notebooks: Deep learning (TensorFlow, Theano, Caffe), scikit-learn, Kaggle, big data (Spark, Hadoop MapReduce, HDFS), matplotlib, pandas, NumPy, SciPy, Python essentials, AWS, and various command lines.
Sbeaum/hts-nim
nim wrapper for htslib for parsing genomics data files
Sbeaum/intervaltree
A mutable, self-balancing interval tree. Queries may be by point, by range overlap, or by range containment.
Sbeaum/kann
A lightweight C library for artificial neural networks
Sbeaum/knitr
A general-purpose tool for dynamic report generation in R
Sbeaum/Platypus
Platypus Variant Caller
Sbeaum/PyVCF
A Variant Call Format reader for Python.