SiYangming's Stars
swolock/scrublet
Detect doublets in single-cell RNA-seq data
STOmics/SAW
langchain-ai/chat-langchain
tatsu-lab/stanford_alpaca
Code and documentation to train Stanford's Alpaca models, and generate the data.
bio-cui/siGCD
siGCD: a webserver to explore survival interaction of genes, cells and drugs in human cancers
griffithlab/convert_zero_one_based
Python CLI to convert between zero and one based genomic coordinate systems
IanevskiAleksandr/sc-type
DAMO-NLP-SG/Video-LLaMA
[EMNLP 2023 Demo] Video-LLaMA: An Instruction-tuned Audio-Visual Language Model for Video Understanding
BioMolecularPhysicsGroup-UNCC/MachineLearning
Development of ML tools
10XGenomics/loupeR
Convert Seurat objects to 10x Genomics Loupe files.
OSU-BMBL/IRIS3
IRIS3: Integrated Cell-type-specific Regulon Inference Server from Single-cell RNA-Seq (https://bmbl.bmi.osumc.edu/iris3/)
vandijklab/cell2sentence-ft
Cell2Sentence turns scRNA-seq data into text for LLM training.
snakemake/snakemake
This is the development home of the workflow management system Snakemake. For general information, see
PubPeerFoundation/pubpeer_zotero_plugin
Plugin to show if references in Zotero have PubPeer comments
openbiox/UCSCXenaShiny
📊 An R package for interactively exploring UCSC Xena https://xenabrowser.net/datapages/; Book: https://lishensuo.github.io/UCSCXenaShiny_Book; App online: https://shiny.hiplot.cn/ucsc-xena-shiny/, https://shiny.zhoulab.ac.cn/UCSCXenaShiny
gagneurlab/MMSplice_paper
Analysis code of MMSplice paper
fpy94/PEPMAN
A deep learning model for RNA polymerase II (Pol II) pausing prediction
mtitarik/DeepDSSR
Bonidia/MathFeature-WebServer
MathFeature-WebServer
Bonidia/BioAutoML
BioAutoML: Automated Feature Engineering and Metalearning
Bonidia/MathFeature
Feature Extraction Package for Biological Sequences
SiYangming/BioAutoML
BioAutoML: Automated Feature Engineering and Metalearning
CherWeiYuan/repDNA
repDNA is a Python package to generate various features of DNA sequences incorporating physicochemical properties and sequence-order effects.
liufule12/repDNA
repDNA is a Python package to generate various features of DNA sequences incorporating physicochemical properties and sequence-order effects.
PKU-YuanGroup/ChatLaw
ChatLaw:A Powerful LLM Tailored for Chinese Legal. 中文法律大模型
gaohanghang/WeChatRead
微信读书Mac客户端
magicdawn/weread-spy
weread-spy: 使用微信读书 Web 版生成 ePub 电子书
wwood/kingfisher-download
Easier download/extract of FASTA/Q read data and metadata from the ENA, NCBI, AWS or GCP.
xiaopangxia/TCM-Ancient-Books
中医药古籍文本,近700项
openai/shap-e
Generate 3D objects conditioned on text or images