Use Snakemake disk_mb resource to set HTCondor request_disk
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agitter commented
Currently grid-submit.py
checks whether the Snakemake mem_mb
resource is set. If it is, that value is used to set the HTCondor request_memory
attribute. The same can happen with disk by checking disk_mb
and setting request_disk
. This caused a problem for me when I tried using this profile to submit to a HTCondor queue that is configured to reject all jobs that do not set request_disk
.