FlowSOMSubset does not subset CV values
stu-blair opened this issue · 0 comments
stu-blair commented
When I build a FlowSOM object on multiple files, then take a subset of it for one file using FlowSOMSubset
, then call GetMFIs
on that subset, the MFIs are returned just for the subset. But when I do the same thing using GetCVs
, the values are unchanged.
Looking at the FlowSOMSubset
code, I can see that the $map$medianValues
get specifically updated, but I see no similar code for $map$cvValues
I think this is a bug, but I may be misunderstanding something.